Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.5□□□□□ -1.53
PDGFBP01127 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDGFBP01127 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFBP01127 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PDGFBP01127 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.49□□□□□ -1.53
PDGFBP01127 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFBP01127 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFBP01127 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFBP01127 RN7SKP95-201ENST00000362860 303 ntBASIC5.49□□□□□ -1.53
PDGFBP01127 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFBP01127 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
PDGFBP01127 RNA5SP91-201ENST00000390902 119 ntBASIC5.49□□□□□ -1.53
PDGFBP01127 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.49□□□□□ -1.53
PDGFBP01127 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.49□□□□□ -1.53
PDGFBP01127 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFBP01127 RPS27AP6-201ENST00000427962 448 ntBASIC5.49□□□□□ -1.53
PDGFBP01127 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFBP01127 AL451136.1-201ENST00000435399 325 ntBASIC5.49□□□□□ -1.53
PDGFBP01127 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.49□□□□□ -1.53
PDGFBP01127 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.49□□□□□ -1.53
PDGFBP01127 Z92846.1-201ENST00000456203 268 ntBASIC5.49□□□□□ -1.53
PDGFBP01127 CCNHP1-201ENST00000513311 678 ntBASIC5.49□□□□□ -1.53
PDGFBP01127 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.49□□□□□ -1.53
PDGFBP01127 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFBP01127 AC134349.2-201ENST00000535136 910 ntBASIC5.49□□□□□ -1.53
PDGFBP01127 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.49□□□□□ -1.53
PDGFBP01127 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PDGFBP01127 AC008147.3-201ENST00000548666 354 ntBASIC5.49□□□□□ -1.53
PDGFBP01127 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFBP01127 EDDM3DP-201ENST00000554692 434 ntBASIC5.49□□□□□ -1.53
PDGFBP01127 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.49□□□□□ -1.53
PDGFBP01127 PARP1P2-201ENST00000556806 195 ntBASIC5.49□□□□□ -1.53
PDGFBP01127 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFBP01127 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.49□□□□□ -1.53
PDGFBP01127 AC068831.8-201ENST00000620171 435 ntBASIC5.49□□□□□ -1.53
PDGFBP01127 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.49□□□□□ -1.53
PDGFBP01127 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.49□□□□□ -1.53
PDGFBP01127 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFBP01127 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFBP01127 MT-RNR2-201ENST00000387347 1559 ntBASIC5.49□□□□□ -1.53
PDGFBP01127 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
PDGFBP01127 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFBP01127 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFBP01127 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFBP01127 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.49□□□□□ -1.53
PDGFBP01127 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDGFBP01127 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.49□□□□□ -1.53
PDGFBP01127 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFBP01127 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.48□□□□□ -1.53
PDGFBP01127 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.48□□□□□ -1.53
PDGFBP01127 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.48□□□□□ -1.53
PDGFBP01127 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFBP01127 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PDGFBP01127 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFBP01127 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.48□□□□□ -1.53
PDGFBP01127 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PDGFBP01127 THAP12P4-201ENST00000528321 2266 ntBASIC5.48□□□□□ -1.53
PDGFBP01127 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PDGFBP01127 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFBP01127 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.48□□□□□ -1.53
PDGFBP01127 AC119751.6-201ENST00000416712 186 ntBASIC5.48□□□□□ -1.53
PDGFBP01127 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.48□□□□□ -1.53
PDGFBP01127 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.48□□□□□ -1.53
PDGFBP01127 HMGB3P10-201ENST00000434734 572 ntBASIC5.48□□□□□ -1.53
PDGFBP01127 RHOT1P3-201ENST00000436571 331 ntBASIC5.48□□□□□ -1.53
PDGFBP01127 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PDGFBP01127 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.48□□□□□ -1.53
PDGFBP01127 MTND4LP12-201ENST00000448237 295 ntBASIC5.48□□□□□ -1.53
PDGFBP01127 MTND6P32-201ENST00000457611 483 ntBASIC5.48□□□□□ -1.53
PDGFBP01127 RPS23P7-201ENST00000466210 444 ntBASIC5.48□□□□□ -1.53
PDGFBP01127 AC026782.2-201ENST00000510845 636 ntBASIC5.48□□□□□ -1.53
PDGFBP01127 RN7SKP248-201ENST00000516278 305 ntBASIC5.48□□□□□ -1.53
PDGFBP01127 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFBP01127 AL358913.1-201ENST00000554342 121 ntBASIC5.48□□□□□ -1.53
PDGFBP01127 SNORD39.2-201ENST00000579995 76 ntBASIC5.48□□□□□ -1.53
PDGFBP01127 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.48□□□□□ -1.53
PDGFBP01127 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.48□□□□□ -1.53
PDGFBP01127 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.48□□□□□ -1.53
PDGFBP01127 AL031658.2-201ENST00000616850 651 ntBASIC5.48□□□□□ -1.53
PDGFBP01127 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFBP01127 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.48□□□□□ -1.53
PDGFBP01127 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFBP01127 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.48□□□□□ -1.53
PDGFBP01127 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFBP01127 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.48□□□□□ -1.53
PDGFBP01127 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFBP01127 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFBP01127 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.48□□□□□ -1.53
PDGFBP01127 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PDGFBP01127 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PDGFBP01127 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFBP01127 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFBP01127 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
PDGFBP01127 AC003985.2-201ENST00000562268 1669 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFBP01127 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFBP01127 AC144833.1-201ENST00000567953 4089 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 AP002512.4-202ENST00000641599 4530 ntBASIC5.47□□□□□ -1.53
PDGFBP01127 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDGFBP01127 AC079741.1-201ENST00000321498 212 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms