Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC008638.1-201ENST00000506035 866 ntBASIC5.05□□□□□ -1.6
HCN1O60741 AC098976.1-201ENST00000513014 541 ntBASIC5.05□□□□□ -1.6
HCN1O60741 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.05□□□□□ -1.6
HCN1O60741 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.05□□□□□ -1.6
HCN1O60741 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.05□□□□□ -1.6
HCN1O60741 AC234775.3-201ENST00000564612 656 ntBASIC5.05□□□□□ -1.6
HCN1O60741 AC127024.5-201ENST00000580085 462 ntBASIC5.05□□□□□ -1.6
HCN1O60741 MIR4472-2-201ENST00000582069 67 ntBASIC5.05□□□□□ -1.6
HCN1O60741 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.05□□□□□ -1.6
HCN1O60741 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.05□□□□□ -1.6
HCN1O60741 WBP1LP8-201ENST00000617401 327 ntBASIC5.05□□□□□ -1.6
HCN1O60741 AC005840.5-201ENST00000619166 599 ntBASIC5.05□□□□□ -1.6
HCN1O60741 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.05□□□□□ -1.6
HCN1O60741 AC004808.2-201ENST00000627965 773 ntBASIC5.05□□□□□ -1.6
HCN1O60741 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.05□□□□□ -1.6
HCN1O60741 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCN1O60741 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCN1O60741 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HCN1O60741 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HCN1O60741 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HCN1O60741 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
HCN1O60741 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.04□□□□□ -1.6
HCN1O60741 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HCN1O60741 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.04□□□□□ -1.6
HCN1O60741 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HCN1O60741 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HCN1O60741 AC008079.2-201ENST00000623543 20396 ntBASIC5.04□□□□□ -1.6
HCN1O60741 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.04□□□□□ -1.6
HCN1O60741 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HCN1O60741 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.04□□□□□ -1.6
HCN1O60741 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HCN1O60741 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.04□□□□□ -1.6
HCN1O60741 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HCN1O60741 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HCN1O60741 NFYAP1-201ENST00000431953 972 ntBASIC5.04□□□□□ -1.6
HCN1O60741 OR6D1P-201ENST00000436165 939 ntBASIC5.04□□□□□ -1.6
HCN1O60741 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.04□□□□□ -1.6
HCN1O60741 OR52E3P-201ENST00000452083 936 ntBASIC5.04□□□□□ -1.6
HCN1O60741 AL606490.1-201ENST00000452266 765 ntBASIC5.04□□□□□ -1.6
HCN1O60741 RPL7P45-201ENST00000455851 743 ntBASIC5.04□□□□□ -1.6
HCN1O60741 AC011225.1-201ENST00000457751 369 ntBASIC5.04□□□□□ -1.6
HCN1O60741 COPS8P2-201ENST00000473228 627 ntBASIC5.04□□□□□ -1.6
HCN1O60741 RNA5SP34-201ENST00000516887 130 ntBASIC5.04□□□□□ -1.6
HCN1O60741 RN7SKP99-201ENST00000517028 307 ntBASIC5.04□□□□□ -1.6
HCN1O60741 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.04□□□□□ -1.6
HCN1O60741 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.04□□□□□ -1.6
HCN1O60741 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.04□□□□□ -1.6
HCN1O60741 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.04□□□□□ -1.6
HCN1O60741 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HCN1O60741 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
HCN1O60741 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
HCN1O60741 OR7E18P-201ENST00000592589 702 ntBASIC5.04□□□□□ -1.6
HCN1O60741 FKBP1AP1-201ENST00000594588 318 ntBASIC5.04□□□□□ -1.6
HCN1O60741 AC025574.2-201ENST00000615621 514 ntBASIC5.04□□□□□ -1.6
HCN1O60741 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.04□□□□□ -1.6
HCN1O60741 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HCN1O60741 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HCN1O60741 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HCN1O60741 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.04□□□□□ -1.6
HCN1O60741 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HCN1O60741 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HCN1O60741 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HCN1O60741 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.03□□□□□ -1.6
HCN1O60741 AL513548.1-201ENST00000562904 1724 ntBASIC5.03□□□□□ -1.6
HCN1O60741 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HCN1O60741 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
HCN1O60741 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
HCN1O60741 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.03□□□□□ -1.6
HCN1O60741 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HCN1O60741 RN7SKP74-201ENST00000362849 309 ntBASIC5.03□□□□□ -1.6
HCN1O60741 RNA5SP234-201ENST00000363916 119 ntBASIC5.03□□□□□ -1.6
HCN1O60741 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.03□□□□□ -1.6
HCN1O60741 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HCN1O60741 MIR1178-201ENST00000408396 91 ntBASIC5.03□□□□□ -1.6
HCN1O60741 CTSL3P-202ENST00000412179 788 ntBASIC5.03□□□□□ -1.6
HCN1O60741 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.03□□□□□ -1.6
HCN1O60741 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.03□□□□□ -1.6
HCN1O60741 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.03□□□□□ -1.6
HCN1O60741 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.03□□□□□ -1.6
HCN1O60741 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.03□□□□□ -1.6
HCN1O60741 MTCO3P17-201ENST00000443775 513 ntBASIC5.03□□□□□ -1.6
HCN1O60741 TAAR4P-201ENST00000454843 1039 ntBASIC5.03□□□□□ -1.6
HCN1O60741 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.03□□□□□ -1.6
HCN1O60741 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.03□□□□□ -1.6
HCN1O60741 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.03□□□□□ -1.6
HCN1O60741 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.03□□□□□ -1.6
HCN1O60741 AC021106.1-201ENST00000509020 1058 ntBASIC5.03□□□□□ -1.6
HCN1O60741 AC091912.1-201ENST00000511351 248 ntBASIC5.03□□□□□ -1.6
HCN1O60741 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.03□□□□□ -1.6
HCN1O60741 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.03□□□□□ -1.6
HCN1O60741 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.03□□□□□ -1.6
HCN1O60741 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.03□□□□□ -1.6
HCN1O60741 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HCN1O60741 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HCN1O60741 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.03□□□□□ -1.6
HCN1O60741 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.03□□□□□ -1.6
HCN1O60741 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.03□□□□□ -1.6
HCN1O60741 AC013244.1-201ENST00000604279 193 ntBASIC5.03□□□□□ -1.6
HCN1O60741 SDR42E1P1-201ENST00000611327 477 ntBASIC5.03□□□□□ -1.6
HCN1O60741 AL356752.1-201ENST00000615844 593 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms