Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNX3O60493 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNX3O60493 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNX3O60493 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SNX3O60493 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNX3O60493 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SNX3O60493 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SNX3O60493 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.15□□□□□ -1.58
SNX3O60493 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.15□□□□□ -1.58
SNX3O60493 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SNX3O60493 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SNX3O60493 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SNX3O60493 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
SNX3O60493 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.15□□□□□ -1.58
SNX3O60493 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SNX3O60493 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SNX3O60493 RN7SKP28-201ENST00000364770 305 ntBASIC5.15□□□□□ -1.59
SNX3O60493 MIR421-201ENST00000365696 85 ntBASIC5.15□□□□□ -1.59
SNX3O60493 OR13C3-201ENST00000374781 1108 ntBASIC5.15□□□□□ -1.59
SNX3O60493 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SNX3O60493 RNU6-883P-201ENST00000384597 107 ntBASIC5.15□□□□□ -1.59
SNX3O60493 ST13P16-201ENST00000401760 781 ntBASIC5.15□□□□□ -1.59
SNX3O60493 AC019070.1-201ENST00000415008 1024 ntBASIC5.15□□□□□ -1.59
SNX3O60493 HMGB3P24-201ENST00000433260 622 ntBASIC5.15□□□□□ -1.59
SNX3O60493 ZFAND6P1-201ENST00000434138 605 ntBASIC5.15□□□□□ -1.59
SNX3O60493 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX3O60493 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SNX3O60493 AL672138.1-201ENST00000450604 1015 ntBASIC5.15□□□□□ -1.59
SNX3O60493 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX3O60493 VDAC2P4-201ENST00000452925 711 ntBASIC5.15□□□□□ -1.59
SNX3O60493 AP000547.1-201ENST00000454360 617 ntBASIC5.15□□□□□ -1.59
SNX3O60493 AC239798.3-201ENST00000454459 408 ntBASIC5.15□□□□□ -1.59
SNX3O60493 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX3O60493 RN7SL189P-201ENST00000468631 289 ntBASIC5.15□□□□□ -1.59
SNX3O60493 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
SNX3O60493 ARL4AP1-201ENST00000503220 705 ntBASIC5.15□□□□□ -1.59
SNX3O60493 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX3O60493 ENPP7P9-201ENST00000514456 627 ntBASIC5.15□□□□□ -1.59
SNX3O60493 RNA5SP96-201ENST00000516041 107 ntBASIC5.15□□□□□ -1.59
SNX3O60493 RNU6-491P-201ENST00000516099 110 ntBASIC5.15□□□□□ -1.59
SNX3O60493 RNA5SP441-201ENST00000516809 88 ntBASIC5.15□□□□□ -1.59
SNX3O60493 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX3O60493 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX3O60493 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.15□□□□□ -1.59
SNX3O60493 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX3O60493 AC092868.3-201ENST00000560515 784 ntBASIC5.15□□□□□ -1.59
SNX3O60493 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX3O60493 WBP1LP12-201ENST00000604449 331 ntBASIC5.15□□□□□ -1.59
SNX3O60493 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX3O60493 SNORD91B-202ENST00000608459 222 ntBASIC5.15□□□□□ -1.59
SNX3O60493 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SNX3O60493 AC092266.1-201ENST00000610958 165 ntBASIC5.15□□□□□ -1.59
SNX3O60493 OR8G7P-201ENST00000616658 848 ntBASIC5.15□□□□□ -1.59
SNX3O60493 AC015722.2-201ENST00000622210 551 ntBASIC5.15□□□□□ -1.59
SNX3O60493 AL390318.1-201ENST00000624564 687 ntBASIC5.15□□□□□ -1.59
SNX3O60493 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX3O60493 AC091948.2-201ENST00000636510 279 ntBASIC5.15□□□□□ -1.59
SNX3O60493 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SNX3O60493 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX3O60493 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SNX3O60493 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SNX3O60493 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SNX3O60493 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SNX3O60493 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SNX3O60493 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SNX3O60493 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
SNX3O60493 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.14□□□□□ -1.59
SNX3O60493 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX3O60493 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX3O60493 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SNX3O60493 AC097461.1-201ENST00000568928 2821 ntBASIC5.14□□□□□ -1.59
SNX3O60493 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX3O60493 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX3O60493 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX3O60493 AL390316.1-201ENST00000406279 553 ntBASIC5.14□□□□□ -1.59
SNX3O60493 RN7SKP199-201ENST00000410325 305 ntBASIC5.14□□□□□ -1.59
SNX3O60493 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX3O60493 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.14□□□□□ -1.59
SNX3O60493 AL139148.1-201ENST00000427122 680 ntBASIC5.14□□□□□ -1.59
SNX3O60493 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.14□□□□□ -1.59
SNX3O60493 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SNX3O60493 RPEP4-201ENST00000437636 602 ntBASIC5.14□□□□□ -1.59
SNX3O60493 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.14□□□□□ -1.59
SNX3O60493 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX3O60493 RPL5P7-201ENST00000444235 813 ntBASIC5.14□□□□□ -1.59
SNX3O60493 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SNX3O60493 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.14□□□□□ -1.59
SNX3O60493 CST12P-201ENST00000457644 362 ntBASIC5.14□□□□□ -1.59
SNX3O60493 GYG1P1-201ENST00000460864 698 ntBASIC5.14□□□□□ -1.59
SNX3O60493 STRADBP1-201ENST00000478954 1281 ntBASIC5.14□□□□□ -1.59
SNX3O60493 AC098583.1-201ENST00000480875 255 ntBASIC5.14□□□□□ -1.59
SNX3O60493 AC020890.1-201ENST00000491837 504 ntBASIC5.14□□□□□ -1.59
SNX3O60493 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX3O60493 NENFP3-201ENST00000503735 313 ntBASIC5.14□□□□□ -1.59
SNX3O60493 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX3O60493 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX3O60493 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX3O60493 OR4V1P-201ENST00000525394 1140 ntBASIC5.14□□□□□ -1.59
SNX3O60493 HMGB1P42-201ENST00000532126 553 ntBASIC5.14□□□□□ -1.59
SNX3O60493 AP004607.2-201ENST00000533949 322 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms