Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 HMGN2P27-201ENST00000427352 270 ntBASIC5.04□□□□□ -1.6
LRIT2A6NDA9 AC090018.1-201ENST00000434369 367 ntBASIC5.04□□□□□ -1.6
LRIT2A6NDA9 RAB9AP5-201ENST00000437794 597 ntBASIC5.04□□□□□ -1.6
LRIT2A6NDA9 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.04□□□□□ -1.6
LRIT2A6NDA9 RAB9AP2-201ENST00000443911 597 ntBASIC5.04□□□□□ -1.6
LRIT2A6NDA9 AL157385.1-201ENST00000446973 268 ntBASIC5.04□□□□□ -1.6
LRIT2A6NDA9 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 HMGB3P14-201ENST00000494195 599 ntBASIC5.04□□□□□ -1.6
LRIT2A6NDA9 PGAM1P13-201ENST00000507497 754 ntBASIC5.04□□□□□ -1.6
LRIT2A6NDA9 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 NMNAT1P5-201ENST00000559657 841 ntBASIC5.04□□□□□ -1.6
LRIT2A6NDA9 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 AC003985.2-201ENST00000562268 1669 ntBASIC5.04□□□□□ -1.6
LRIT2A6NDA9 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 AL031595.2-201ENST00000624215 19071 ntBASIC5.04□□□□□ -1.6
LRIT2A6NDA9 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LRIT2A6NDA9 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 SNORA67-201ENST00000384423 137 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 MIR105-1-201ENST00000385222 81 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AL391361.1-201ENST00000405580 489 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AC098592.2-201ENST00000413158 265 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 RPL35AP24-201ENST00000413846 330 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 VN1R31P-201ENST00000417498 730 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 RFESDP1-201ENST00000422350 461 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 NOP56P2-201ENST00000447491 769 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 RPL7P39-201ENST00000481157 744 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 RPL7P41-201ENST00000485823 957 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AC098976.1-201ENST00000513014 541 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AC020937.1-201ENST00000519677 1013 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AC027026.1-201ENST00000532323 742 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AL049779.2-201ENST00000553847 315 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AC106730.2-201ENST00000566641 540 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 MIR3176-201ENST00000582210 90 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AC069307.1-201ENST00000602820 447 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 IMMP1LP3-201ENST00000604197 224 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AC109309.2-201ENST00000612597 332 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 MIR6862-1-201ENST00000613016 70 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 MIR6862-2-201ENST00000614755 70 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AC068870.3-201ENST00000625077 2536 ntBASIC5.03□□□□□ -1.6
LRIT2A6NDA9 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LRIT2A6NDA9 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.02□□□□□ -1.61
LRIT2A6NDA9 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LRIT2A6NDA9 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.02□□□□□ -1.61
LRIT2A6NDA9 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LRIT2A6NDA9 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.02□□□□□ -1.61
LRIT2A6NDA9 AC023421.1-201ENST00000590535 1785 ntBASIC5.02□□□□□ -1.61
LRIT2A6NDA9 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms