Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 HMGB1P23-201ENST00000518743 568 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AP003467.2-201ENST00000520175 319 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 ATP5J2P4-201ENST00000538774 267 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC078814.3-201ENST00000553036 491 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC044860.3-201ENST00000559957 368 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 H3F3BP2-201ENST00000583907 357 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 NRBF2P1-201ENST00000587407 859 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AL162413.1-201ENST00000603198 110 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC139792.3-201ENST00000623525 224 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC073488.8-201ENST00000631952 757 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AL139805.2-201ENST00000455305 2433 ntBASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PCDHB11Q9Y5F2 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 GTF2IP1-202ENST00000614592 2047 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 RNA5SP448-201ENST00000363151 111 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 SNORA51.2-201ENST00000364595 132 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 Y_RNA.481-201ENST00000384373 102 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 PEX12P1-201ENST00000400284 1048 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 Z97832.1-201ENST00000402490 328 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 RNU6-908P-201ENST00000410160 94 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 MTND3P17-201ENST00000416968 344 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 SAR1AP4-201ENST00000429225 591 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 SKP1P1-201ENST00000438081 489 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 HMGB3P9-201ENST00000441799 583 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 RPS7P4-201ENST00000444127 582 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AL935212.3-201ENST00000450729 284 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 RPL26P30-201ENST00000453533 435 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC005550.2-201ENST00000476382 318 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 RPL7AP30-201ENST00000482859 796 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC095059.2-201ENST00000510601 933 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC013828.2-201ENST00000532487 235 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AL352979.3-201ENST00000553515 247 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 HIF1AP1-201ENST00000553642 175 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 PSMA3P-201ENST00000555485 635 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC015917.1-201ENST00000579654 510 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC011193.2-201ENST00000582638 367 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 VN1R80P-201ENST00000597126 338 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AL391646.1-201ENST00000603860 190 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AL158801.5-201ENST00000623123 465 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC099667.1-201ENST00000624222 469 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC091905.1-201ENST00000624400 311 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC005618.4-201ENST00000625053 554 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC243725.1-201ENST00000637164 436 ntBASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDHB11Q9Y5F2 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms