Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AP003170.5-201ENST00000397185 335 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AC013262.1-201ENST00000426710 252 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AL022331.1-201ENST00000429025 477 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AL390879.1-201ENST00000439143 386 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AC092647.3-201ENST00000443044 633 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AL009048.1-201ENST00000450437 298 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AL162739.1-201ENST00000450606 307 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AC016687.1-201ENST00000482574 353 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AC093663.2-201ENST00000484625 313 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 EIF3LP3-201ENST00000495197 822 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 RNA5SP362-201ENST00000516048 118 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 RNU6-615P-201ENST00000516065 106 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 HMGB1P42-201ENST00000532126 553 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 UBTFL9-201ENST00000534504 1148 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AL049872.1-201ENST00000556323 322 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AC022022.2-201ENST00000602989 360 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AC013444.2-201ENST00000603317 787 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AC004890.3-201ENST00000605566 1095 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AC009501.3-201ENST00000605001 1352 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 PCF11-AS1-201ENST00000602322 1516 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 CIR1P2-201ENST00000514821 1342 ntBASIC6.76□□□□□ -1.33
CTDP1Q9Y5B0 AL034546.1-201ENST00000623740 3693 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 RNU6-792P-201ENST00000363490 107 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 OR3A2-201ENST00000408891 1076 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AC005005.2-201ENST00000420779 380 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 XKRYP1-201ENST00000423438 492 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 XKRYP2-201ENST00000432915 492 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AL731534.1-201ENST00000434711 269 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 Z84478.1-201ENST00000438230 1219 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AL591719.1-201ENST00000444669 744 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AC006326.1-201ENST00000445465 787 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 SEPT7P3-201ENST00000455017 621 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AL603882.1-201ENST00000463059 681 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 RPL17P2-201ENST00000491913 451 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AC111000.6-201ENST00000514471 709 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 UBTFL10-201ENST00000528532 562 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 OR4A40P-201ENST00000533878 948 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AC090651.1-201ENST00000567865 634 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AP001160.4-201ENST00000596971 382 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AC146944.4-201ENST00000602697 718 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AC104695.2-201ENST00000605056 775 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AC022467.1-201ENST00000614738 749 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 AL355493.4-201ENST00000618530 292 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 CR788268.1-201ENST00000603931 1809 ntBASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CTDP1Q9Y5B0 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CTDP1Q9Y5B0 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms