Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
SIX2Q9NPC8 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 PANDAR-201ENST00000629595 1506 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 AC100778.3-201ENST00000580060 1750 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 MIR143-201ENST00000385300 106 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 AL389925.1-201ENST00000432257 728 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 KATNBL1P2-201ENST00000433311 835 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 SPRYD7P1-201ENST00000443861 570 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 AC017099.1-201ENST00000448261 1028 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 RN7SL174P-201ENST00000475578 289 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 AC104109.1-201ENST00000498563 436 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 AC024558.1-201ENST00000505008 528 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 SNORD116-30-201ENST00000516468 85 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 AL162574.2-201ENST00000614618 657 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 AL354696.1-201ENST00000614652 497 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 AC006213.4-201ENST00000616184 634 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 CASC19-264ENST00000641912 1184 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 CASC19-221ENST00000641309 1382 ntBASIC5.53□□□□□ -1.52
SIX2Q9NPC8 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.53□□□□□ -1.52
SIX2Q9NPC8 AC011493.1-201ENST00000596753 1632 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 AC211486.3-201ENST00000412694 621 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 PCNPP4-201ENST00000414817 517 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 AC019070.1-201ENST00000415008 1024 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 RSL24D1P8-201ENST00000434442 492 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 OR52B5P-201ENST00000435337 951 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 AC245047.2-201ENST00000441060 530 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 NDUFA5P8-201ENST00000449019 346 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 AP001960.1-201ENST00000506494 658 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 AC113398.2-201ENST00000507630 558 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 GTF2F2P1-201ENST00000511083 675 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 IGKV2-18-201ENST00000522607 343 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 AC006349.1-201ENST00000555526 235 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 BNIP3P7-201ENST00000605641 516 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 AC138473.1-201ENST00000605717 526 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 BX005214.3-202ENST00000619809 325 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 AL049767.1-202ENST00000637826 242 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 OR52B5P-202ENST00000641118 1110 ntBASIC5.52□□□□□ -1.53
SIX2Q9NPC8 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIX2Q9NPC8 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.51□□□□□ -1.53
SIX2Q9NPC8 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms