Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL137058.3-201ENST00000624531 3099 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 SNORA56-201ENST00000383966 129 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 RNA5SP87-201ENST00000384155 118 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 MRPS21P2-201ENST00000424704 264 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 RPL12P17-201ENST00000432393 498 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC000111.2-201ENST00000448200 210 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC009127.1-201ENST00000467090 155 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC109462.1-201ENST00000491087 368 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC105233.1-201ENST00000498840 781 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC092709.1-201ENST00000521355 1045 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC021006.3-201ENST00000530771 192 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC019322.1-201ENST00000571869 389 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 BNIP3P35-201ENST00000604530 490 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.64□□□□□ -1.67
KIAA1549Q9HCM3 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 CASC19-281ENST00000642118 1554 ntBASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 AC079809.1-201ENST00000415468 276 ntBASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 AC097173.1-201ENST00000505862 819 ntBASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 AC010168.2-201ENST00000562691 5428 ntBASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
KIAA1549Q9HCM3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AC092376.2-201ENST00000622621 4116 ntBASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AL139128.1-201ENST00000413921 941 ntBASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AC093655.2-201ENST00000425735 631 ntBASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 RPS4XP16-201ENST00000427198 791 ntBASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AL359265.1-201ENST00000440296 795 ntBASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 AC011626.1-201ENST00000604710 562 ntBASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 Z95327.3-201ENST00000610385 572 ntBASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC4.62□□□□□ -1.67
KIAA1549Q9HCM3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms