Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 HSPA8P19-201ENST00000505359 1517 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 OR9K1P-202ENST00000641111 3217 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 CR848007.2-201ENST00000424918 787 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AL590623.1-201ENST00000427864 105 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 UBE2V1P6-201ENST00000430840 422 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AC138761.5-201ENST00000433967 325 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 ZFAND6P1-201ENST00000434138 605 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 NPM1P18-201ENST00000434232 732 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 CNOT7P2-201ENST00000441051 832 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 EEF1B2P5-201ENST00000444820 548 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 FCF1P6-201ENST00000456841 595 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 PGAM1P13-201ENST00000507497 754 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AC008628.1-201ENST00000508663 265 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 HAUS8P1-201ENST00000549005 542 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AL049779.2-201ENST00000553847 315 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AC020915.5-201ENST00000596836 964 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AL118522.2-201ENST00000616045 615 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AC037198.3-201ENST00000616754 526 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AC118658.2-201ENST00000618697 459 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 SAMMSON-209ENST00000641222 1100 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 PWAR1-201ENST00000624188 2414 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 BCORP1-203ENST00000513194 5093 ntBASIC5.79□□□□□ -1.48
EBF3Q9H4W6 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
EBF3Q9H4W6 AL121839.2-201ENST00000565058 6943 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AP001029.2-203ENST00000589795 4910 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC005042.1-201ENST00000393397 800 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 SLC35E1P1-201ENST00000419313 864 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 Z85994.2-201ENST00000434327 452 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 Z80107.1-201ENST00000436830 412 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 TPTE2P3-201ENST00000441562 1189 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 RNF2P1-201ENST00000442955 1010 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC079080.1-201ENST00000479841 822 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC079841.1-201ENST00000481228 950 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 NDUFA5P12-201ENST00000503796 343 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 IGLV3-24-201ENST00000517477 197 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC138701.1-201ENST00000524329 714 ntBASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.78□□□□□ -1.48
EBF3Q9H4W6 AC027216.1-201ENST00000577726 685 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms