Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 USP9YP20-201ENST00000419224 558 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 Z82198.3-201ENST00000421145 199 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 LARP1BP3-201ENST00000437229 869 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AC064862.5-201ENST00000440618 334 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AL031681.1-201ENST00000443304 400 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AL050341.1-201ENST00000447743 313 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 RPS18P1-201ENST00000447840 458 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AL354685.2-201ENST00000448218 1447 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AL034418.1-201ENST00000448675 860 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 RPL36AP33-201ENST00000450395 310 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 RPL21P134-201ENST00000453468 483 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AC115223.1-201ENST00000466377 870 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 RN7SL83P-201ENST00000468131 297 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 RPL7P18-201ENST00000478965 734 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 NCOR1P1-202ENST00000486162 291 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 ARL2BPP4-201ENST00000506854 471 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AC090071.1-201ENST00000507713 644 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 PRELID3BP4-201ENST00000515476 571 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 RN7SKP141-201ENST00000516167 338 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AP001207.1-201ENST00000524051 481 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AC007068.2-201ENST00000543168 395 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 RN7SL270P-201ENST00000579643 281 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AC133552.5-201ENST00000604266 540 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AC092354.1-201ENST00000606057 376 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AC005021.1-201ENST00000608730 355 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AL592148.2-201ENST00000612210 372 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 MIR7854-201ENST00000620068 65 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AC022509.4-201ENST00000621404 572 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AL359697.1-201ENST00000624879 587 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AC079298.1-201ENST00000625026 1619 ntBASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.61□□□□□ -1.51
SSBP3Q9BWW4 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 AC008957.3-201ENST00000624112 2242 ntBASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 KYNUP3-201ENST00000574386 1341 ntBASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 RNU6-931P-201ENST00000363850 107 ntBASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 snoZ40.1-201ENST00000364540 72 ntBASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 RNY3P10-201ENST00000384764 102 ntBASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 SNORD65C-201ENST00000390962 71 ntBASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 RN7SKP271-201ENST00000410528 320 ntBASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 TPMTP3-201ENST00000411928 735 ntBASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 AC098592.2-201ENST00000413158 265 ntBASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 AC239367.3-201ENST00000428996 814 ntBASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.6□□□□□ -1.51
SSBP3Q9BWW4 ETF1P3-201ENST00000430422 1160 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms