Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 RN7SL619P-201ENST00000581753 258 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC138761.2-201ENST00000583878 343 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 HIGD1B-203ENST00000587021 457 ntTSL 2 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 SLC6A21P-201ENST00000599458 369 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AL121917.2-201ENST00000605044 390 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AL080312.2-201ENST00000613001 630 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 PROX1-AS1-221ENST00000615085 673 ntTSL 5 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 AL049780.3-201ENST00000624612 1583 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 AC114324.1-201ENST00000504077 3152 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 AP004289.2-201ENST00000444413 1457 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 MAPK10-377ENST00000642006 2752 ntBASIC7.36□□□□□ -1.23
USB1Q9BQ65 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
USB1Q9BQ65 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
USB1Q9BQ65 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 SAG-201ENST00000409110 1591 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 OR10G4-201ENST00000320891 936 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 Y_RNA.148-201ENST00000363557 117 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 Y_RNA.301-201ENST00000364990 103 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 AL451142.1-201ENST00000375867 775 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 HMGB1P17-201ENST00000403495 628 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 AL034374.1-201ENST00000406329 351 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 RN7SKP26-201ENST00000410247 293 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 AL772337.2-201ENST00000411992 981 ntTSL 3 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 AC092066.1-201ENST00000425131 317 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 HMGB3P22-202ENST00000451823 572 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 RN7SL418P-201ENST00000473031 287 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 RN7SL368P-201ENST00000473384 277 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 RN7SL333P-201ENST00000476398 297 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 RPL23AP10-201ENST00000489946 466 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 Z99943.2-201ENST00000507585 266 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 MRPS35P2-201ENST00000508242 191 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 AP002404.1-201ENST00000532005 451 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 MIR3118-1-201ENST00000581787 76 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 OR2T10-202ENST00000642090 3519 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 EIF4BP2-201ENST00000416702 1794 ntBASIC7.35□□□□□ -1.23
USB1Q9BQ65 LINC01291-201ENST00000377469 3662 ntTSL 2 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 LINC01695-203ENST00000453420 4486 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC7.35□□□□□ -1.23
USB1Q9BQ65 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
USB1Q9BQ65 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 316.3 ms