Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC3.98□□□□□ -1.77
LITAFQ99732 AC005951.1-201ENST00000576706 485 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AC008507.3-201ENST00000585753 472 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AP001269.3-201ENST00000588718 329 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AC018638.7-201ENST00000605836 1114 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 FRG2MP-201ENST00000613317 856 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 RN7SL820P-201ENST00000616437 299 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AC027506.1-201ENST00000621395 198 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.98□□□□□ -1.77
LITAFQ99732 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.98□□□□□ -1.77
LITAFQ99732 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
LITAFQ99732 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LITAFQ99732 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC3.98□□□□□ -1.77
LITAFQ99732 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
LITAFQ99732 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LITAFQ99732 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
LITAFQ99732 RALGAPA1P1-201ENST00000443361 6232 ntBASIC3.98□□□□□ -1.77
LITAFQ99732 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC3.98□□□□□ -1.77
LITAFQ99732 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LITAFQ99732 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC3.98□□□□□ -1.77
LITAFQ99732 AC095038.1-201ENST00000429248 1591 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
LITAFQ99732 TEK-205ENST00000615002 4666 ntTSL 5 BASIC3.97□□□□□ -1.77
LITAFQ99732 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LITAFQ99732 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LITAFQ99732 AC090181.3-201ENST00000624777 1514 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
LITAFQ99732 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LITAFQ99732 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LITAFQ99732 AC006206.1-201ENST00000544842 3387 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC3.97□□□□□ -1.77
LITAFQ99732 YES1P1-201ENST00000418510 1628 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LITAFQ99732 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LITAFQ99732 RNA5SP375-201ENST00000362975 119 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 RNU6-353P-201ENST00000364266 108 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LITAFQ99732 RNA5SP91-201ENST00000390902 119 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 RNU1-56P-201ENST00000391303 164 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 ERHP2-201ENST00000402323 299 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 LYPLA1P3-201ENST00000402650 695 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.97□□□□□ -1.77
LITAFQ99732 RPL12P23-201ENST00000405880 490 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 HMGB3P18-201ENST00000406327 590 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 AL590084.1-201ENST00000407885 387 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.97□□□□□ -1.77
LITAFQ99732 SNX18P13-201ENST00000412442 529 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 Z75741.2-201ENST00000417272 1167 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC3.97□□□□□ -1.77
LITAFQ99732 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.97□□□□□ -1.77
LITAFQ99732 RPSAP32-201ENST00000432681 526 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC3.97□□□□□ -1.77
LITAFQ99732 AC096775.1-201ENST00000437724 448 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 CDY12P-201ENST00000440679 1015 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC3.97□□□□□ -1.77
LITAFQ99732 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC3.97□□□□□ -1.77
LITAFQ99732 CDY13P-201ENST00000445813 1015 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 SLAMF6P1-201ENST00000451067 602 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 AC233982.1-201ENST00000451247 436 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC3.97□□□□□ -1.77
LITAFQ99732 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC3.97□□□□□ -1.77
LITAFQ99732 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.97□□□□□ -1.77
LITAFQ99732 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC3.97□□□□□ -1.77
LITAFQ99732 AC083899.1-201ENST00000454465 3819 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC3.97□□□□□ -1.77
LITAFQ99732 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.97□□□□□ -1.77
LITAFQ99732 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC3.97□□□□□ -1.77
LITAFQ99732 PSMC1P13-201ENST00000458195 985 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 AL603882.1-201ENST00000463059 681 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.97□□□□□ -1.77
LITAFQ99732 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LITAFQ99732 RN7SL145P-201ENST00000469955 296 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 RN7SL369P-201ENST00000477138 299 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 RPL38P3-201ENST00000484463 213 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC3.97□□□□□ -1.77
LITAFQ99732 RPL10P7-201ENST00000495649 625 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 AC091435.1-201ENST00000505442 584 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 AK6-204ENST00000512561 587 ntTSL 5 BASIC3.97□□□□□ -1.77
LITAFQ99732 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.97□□□□□ -1.77
LITAFQ99732 RNU6-1129P-201ENST00000515964 104 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.97□□□□□ -1.77
LITAFQ99732 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC3.97□□□□□ -1.77
LITAFQ99732 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC3.97□□□□□ -1.77
LITAFQ99732 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.97□□□□□ -1.77
LITAFQ99732 MTCO3P15-201ENST00000526563 574 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.97□□□□□ -1.77
LITAFQ99732 OR4C1P-201ENST00000530880 937 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC3.97□□□□□ -1.77
LITAFQ99732 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC3.97□□□□□ -1.77
LITAFQ99732 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LITAFQ99732 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC3.97□□□□□ -1.77
LITAFQ99732 AC068305.2-201ENST00000550567 1205 ntBASIC3.97□□□□□ -1.77
LITAFQ99732 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.97□□□□□ -1.77
LITAFQ99732 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC3.97□□□□□ -1.77
LITAFQ99732 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms