Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNA5SP397-201ENST00000391323 118 ntBASIC8.4□□□□□ -1.06
IFT140Q96RY7 AL136116.2-201ENST00000404020 785 ntBASIC8.4□□□□□ -1.06
IFT140Q96RY7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC8.4□□□□□ -1.06
IFT140Q96RY7 RPEP3-201ENST00000425462 676 ntBASIC8.4□□□□□ -1.06
IFT140Q96RY7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC8.4□□□□□ -1.06
IFT140Q96RY7 RN7SL814P-201ENST00000487715 300 ntBASIC8.4□□□□□ -1.06
IFT140Q96RY7 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC8.4□□□□□ -1.06
IFT140Q96RY7 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC8.4□□□□□ -1.06
IFT140Q96RY7 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
IFT140Q96RY7 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
IFT140Q96RY7 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
IFT140Q96RY7 AC015799.1-201ENST00000622996 3122 ntBASIC8.4□□□□□ -1.06
IFT140Q96RY7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC8.4□□□□□ -1.06
IFT140Q96RY7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
IFT140Q96RY7 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
IFT140Q96RY7 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
IFT140Q96RY7 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
IFT140Q96RY7 AC010168.2-201ENST00000562691 5428 ntBASIC8.4□□□□□ -1.07
IFT140Q96RY7 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
IFT140Q96RY7 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
IFT140Q96RY7 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
IFT140Q96RY7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
IFT140Q96RY7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
IFT140Q96RY7 MIR589-201ENST00000385238 99 ntBASIC8.39□□□□□ -1.07
IFT140Q96RY7 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
IFT140Q96RY7 FABP7P1-201ENST00000424004 391 ntBASIC8.39□□□□□ -1.07
IFT140Q96RY7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC8.39□□□□□ -1.07
IFT140Q96RY7 RPL12P28-201ENST00000430852 489 ntBASIC8.39□□□□□ -1.07
IFT140Q96RY7 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC8.39□□□□□ -1.07
IFT140Q96RY7 AC073465.2-201ENST00000440938 498 ntBASIC8.39□□□□□ -1.07
IFT140Q96RY7 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC8.39□□□□□ -1.07
IFT140Q96RY7 RPL7P41-201ENST00000485823 957 ntBASIC8.39□□□□□ -1.07
IFT140Q96RY7 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC8.39□□□□□ -1.07
IFT140Q96RY7 AC105129.1-201ENST00000560250 297 ntBASIC8.39□□□□□ -1.07
IFT140Q96RY7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC8.39□□□□□ -1.07
IFT140Q96RY7 AL121890.3-201ENST00000618494 516 ntBASIC8.39□□□□□ -1.07
IFT140Q96RY7 PDCD6IPP1-202ENST00000622242 1064 ntBASIC8.39□□□□□ -1.07
IFT140Q96RY7 AC004232.3-201ENST00000622977 525 ntBASIC8.39□□□□□ -1.07
IFT140Q96RY7 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC8.39□□□□□ -1.07
IFT140Q96RY7 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
IFT140Q96RY7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
IFT140Q96RY7 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC8.39□□□□□ -1.07
IFT140Q96RY7 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC8.39□□□□□ -1.07
IFT140Q96RY7 ZNF969P-201ENST00000510345 2341 ntBASIC8.39□□□□□ -1.07
IFT140Q96RY7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC8.39□□□□□ -1.07
IFT140Q96RY7 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
IFT140Q96RY7 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC8.39□□□□□ -1.07
IFT140Q96RY7 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
IFT140Q96RY7 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
IFT140Q96RY7 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
IFT140Q96RY7 OR2B7P-201ENST00000429302 934 ntBASIC8.38□□□□□ -1.07
IFT140Q96RY7 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 EEF1A1P1-201ENST00000447052 739 ntBASIC8.38□□□□□ -1.07
IFT140Q96RY7 RPL7P32-201ENST00000457119 744 ntBASIC8.38□□□□□ -1.07
IFT140Q96RY7 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 RPL7AP10-201ENST00000481016 791 ntBASIC8.38□□□□□ -1.07
IFT140Q96RY7 RPS24P16-201ENST00000497294 392 ntBASIC8.38□□□□□ -1.07
IFT140Q96RY7 AC093840.1-201ENST00000511599 336 ntBASIC8.38□□□□□ -1.07
IFT140Q96RY7 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 AC106785.1-201ENST00000565935 262 ntBASIC8.38□□□□□ -1.07
IFT140Q96RY7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 AC079097.1-201ENST00000512187 1399 ntBASIC8.38□□□□□ -1.07
IFT140Q96RY7 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
IFT140Q96RY7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
IFT140Q96RY7 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
IFT140Q96RY7 ATP5HP3-201ENST00000396994 486 ntBASIC8.38□□□□□ -1.07
IFT140Q96RY7 RPS27AP12-201ENST00000429552 465 ntBASIC8.38□□□□□ -1.07
IFT140Q96RY7 ARL2BPP10-201ENST00000446487 531 ntBASIC8.38□□□□□ -1.07
IFT140Q96RY7 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 RPL23AP56-201ENST00000460778 453 ntBASIC8.38□□□□□ -1.07
IFT140Q96RY7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
IFT140Q96RY7 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC8.38□□□□□ -1.07
IFT140Q96RY7 AC060780.2-201ENST00000589047 198 ntBASIC8.38□□□□□ -1.07
IFT140Q96RY7 AC009948.3-201ENST00000603415 1798 ntBASIC8.38□□□□□ -1.07
IFT140Q96RY7 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC8.37□□□□□ -1.07
IFT140Q96RY7 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
IFT140Q96RY7 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC8.37□□□□□ -1.07
IFT140Q96RY7 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
IFT140Q96RY7 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
IFT140Q96RY7 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC8.37□□□□□ -1.07
IFT140Q96RY7 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
IFT140Q96RY7 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.37□□□□□ -1.07
IFT140Q96RY7 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
IFT140Q96RY7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
IFT140Q96RY7 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
IFT140Q96RY7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC8.37□□□□□ -1.07
IFT140Q96RY7 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC8.37□□□□□ -1.07
IFT140Q96RY7 AL117339.4-201ENST00000608335 7063 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms