Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 SNORA73.1-201ENST00000363107 205 ntBASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 SNORA77-201ENST00000408716 125 ntBASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 NUTF2P3-201ENST00000448540 384 ntBASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 RPL23AP56-201ENST00000460778 453 ntBASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 AC079080.1-201ENST00000479841 822 ntBASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 RPS12P31-201ENST00000491419 398 ntBASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 AC006499.6-201ENST00000511169 607 ntBASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CSMD1Q96PZ7 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CSMD1Q96PZ7 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
CSMD1Q96PZ7 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CSMD1Q96PZ7 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CSMD1Q96PZ7 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CSMD1Q96PZ7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 MR1-209ENST00000617803 7584 ntTSL 5 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 SNORA63.1-201ENST00000362493 131 ntBASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 AC130364.2-201ENST00000528639 604 ntBASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 TMBIM7P-201ENST00000418074 855 ntBASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 OR4A6P-201ENST00000534364 970 ntBASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 AC091953.5-201ENST00000622919 233 ntBASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 UGT2B26P-201ENST00000508672 1613 ntBASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 GIGYF2-202ENST00000409196 5747 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC4.21□□□□□ -1.74
CSMD1Q96PZ7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 AC092651.1-201ENST00000426110 312 ntBASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 AC090589.1-201ENST00000473109 362 ntBASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 AC025884.1-201ENST00000556034 378 ntBASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 AP001357.1-201ENST00000586304 1053 ntBASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 SNORA48.4-201ENST00000391089 134 ntBASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 ARL4AP4-201ENST00000434170 518 ntBASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 AC106782.4-201ENST00000568264 210 ntBASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 RN7SL339P-201ENST00000580597 296 ntBASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 AL359195.2-201ENST00000623657 4412 ntBASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 TEX14-202ENST00000349033 4773 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 RN7SL303P-201ENST00000469773 251 ntBASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 RN7SKP83-201ENST00000516512 178 ntBASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 RN7SL176P-201ENST00000580352 264 ntBASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 AC008782.1-201ENST00000603386 430 ntBASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 AC087821.1-201ENST00000623639 567 ntBASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 SAMMSON-210ENST00000641260 1308 ntBASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 ADAM24P-201ENST00000398655 2101 ntBASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CSMD1Q96PZ7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CSMD1Q96PZ7 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CSMD1Q96PZ7 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms