Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC7.25□□□□□ -1.25
CCDC7Q96M83 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC7.25□□□□□ -1.25
CCDC7Q96M83 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.25□□□□□ -1.25
CCDC7Q96M83 DMD-228ENST00000541735 7080 ntTSL 5 BASIC7.25□□□□□ -1.25
CCDC7Q96M83 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
CCDC7Q96M83 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC7Q96M83 BCORP1-203ENST00000513194 5093 ntBASIC7.25□□□□□ -1.25
CCDC7Q96M83 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC7.25□□□□□ -1.25
CCDC7Q96M83 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
CCDC7Q96M83 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC7Q96M83 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC7.25□□□□□ -1.25
CCDC7Q96M83 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC7.25□□□□□ -1.25
CCDC7Q96M83 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC7.25□□□□□ -1.25
CCDC7Q96M83 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
CCDC7Q96M83 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC7.24□□□□□ -1.25
CCDC7Q96M83 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC7Q96M83 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC7Q96M83 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
CCDC7Q96M83 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC7Q96M83 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC7Q96M83 AL035419.1-201ENST00000397037 564 ntBASIC7.24□□□□□ -1.25
CCDC7Q96M83 NUDT19P3-201ENST00000404698 555 ntBASIC7.24□□□□□ -1.25
CCDC7Q96M83 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7.24□□□□□ -1.25
CCDC7Q96M83 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC7Q96M83 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC7.24□□□□□ -1.25
CCDC7Q96M83 AC022133.1-201ENST00000490961 571 ntBASIC7.24□□□□□ -1.25
CCDC7Q96M83 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.24□□□□□ -1.25
CCDC7Q96M83 BRD9P1-201ENST00000529855 560 ntBASIC7.24□□□□□ -1.25
CCDC7Q96M83 PCNPP1-201ENST00000552501 511 ntBASIC7.24□□□□□ -1.25
CCDC7Q96M83 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC7.24□□□□□ -1.25
CCDC7Q96M83 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC7.24□□□□□ -1.25
CCDC7Q96M83 AC090286.3-201ENST00000573133 187 ntBASIC7.24□□□□□ -1.25
CCDC7Q96M83 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC7.24□□□□□ -1.25
CCDC7Q96M83 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.24□□□□□ -1.25
CCDC7Q96M83 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC7.24□□□□□ -1.25
CCDC7Q96M83 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC7Q96M83 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC7Q96M83 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
CCDC7Q96M83 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CCDC7Q96M83 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
CCDC7Q96M83 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
CCDC7Q96M83 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CCDC7Q96M83 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC7Q96M83 PANDAR-201ENST00000629595 1506 ntBASIC7.23□□□□□ -1.25
CCDC7Q96M83 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC7Q96M83 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CCDC7Q96M83 U3.32-201ENST00000408116 212 ntBASIC7.23□□□□□ -1.25
CCDC7Q96M83 AC092647.3-201ENST00000443044 633 ntBASIC7.23□□□□□ -1.25
CCDC7Q96M83 BX842559.2-201ENST00000451418 605 ntBASIC7.23□□□□□ -1.25
CCDC7Q96M83 RN7SL189P-201ENST00000468631 289 ntBASIC7.23□□□□□ -1.25
CCDC7Q96M83 AC005412.2-201ENST00000492004 341 ntBASIC7.23□□□□□ -1.25
CCDC7Q96M83 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.23□□□□□ -1.25
CCDC7Q96M83 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC7.23□□□□□ -1.25
CCDC7Q96M83 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC7Q96M83 MIR4330-201ENST00000579077 105 ntBASIC7.23□□□□□ -1.25
CCDC7Q96M83 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC7Q96M83 AC108359.1-201ENST00000616451 1211 ntBASIC7.23□□□□□ -1.25
CCDC7Q96M83 AL353662.3-201ENST00000625131 237 ntBASIC7.23□□□□□ -1.25
CCDC7Q96M83 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC7Q96M83 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC7Q96M83 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC7Q96M83 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC7Q96M83 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC7Q96M83 ADAM5-202ENST00000399789 1942 ntBASIC7.23□□□□□ -1.25
CCDC7Q96M83 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
CCDC7Q96M83 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
CCDC7Q96M83 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
CCDC7Q96M83 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC7Q96M83 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC7.23□□□□□ -1.25
CCDC7Q96M83 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CCDC7Q96M83 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC7.23□□□□□ -1.25
CCDC7Q96M83 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CCDC7Q96M83 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC7.23□□□□□ -1.25
CCDC7Q96M83 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC7Q96M83 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CCDC7Q96M83 MIR1182-201ENST00000408363 97 ntBASIC7.22□□□□□ -1.25
CCDC7Q96M83 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC7Q96M83 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC7Q96M83 AL049745.1-201ENST00000433953 286 ntBASIC7.22□□□□□ -1.25
CCDC7Q96M83 AC105233.1-201ENST00000498840 781 ntBASIC7.22□□□□□ -1.25
CCDC7Q96M83 RPS4XP20-201ENST00000505751 772 ntBASIC7.22□□□□□ -1.25
CCDC7Q96M83 RN7SKP147-201ENST00000517154 244 ntBASIC7.22□□□□□ -1.25
CCDC7Q96M83 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC7Q96M83 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC7.22□□□□□ -1.25
CCDC7Q96M83 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
CCDC7Q96M83 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC7Q96M83 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC7Q96M83 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC7.22□□□□□ -1.25
CCDC7Q96M83 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
CCDC7Q96M83 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC7Q96M83 TRIM51GP-201ENST00000534741 1350 ntBASIC7.22□□□□□ -1.25
CCDC7Q96M83 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC7Q96M83 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
CCDC7Q96M83 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.22□□□□□ -1.25
CCDC7Q96M83 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC7.22□□□□□ -1.25
CCDC7Q96M83 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC7Q96M83 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
CCDC7Q96M83 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CCDC7Q96M83 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CCDC7Q96M83 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC7.21□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms