Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL049833.3-201ENST00000623920 3738 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 IL1R1-208ENST00000424272 2658 ntTSL 5 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 AL356289.3-201ENST00000640049 2669 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 RASSF5-209ENST00000636182 3427 ntTSL 5 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 Y_RNA.257-201ENST00000364596 102 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 SNORA69-201ENST00000383895 132 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 RNU1-39P-201ENST00000383897 165 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 RNU6-1062P-201ENST00000383908 107 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 RNA5SP185-201ENST00000390963 114 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 FTH1P3-201ENST00000394290 584 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 RN7SKP205-201ENST00000410999 307 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 TEX41-204ENST00000423031 491 ntTSL 4 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 MTCYBP10-201ENST00000424905 650 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 AL627308.1-201ENST00000435693 821 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 AC013399.1-201ENST00000450311 418 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 AC104634.1-201ENST00000452720 462 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 YWHAEP1-201ENST00000453697 763 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 RPS27AP17-201ENST00000463344 455 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 RN7SL393P-201ENST00000463588 296 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 HMGB3P15-201ENST00000507326 574 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 RNU6-388P-201ENST00000517012 105 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 RNU6-389P-201ENST00000517048 105 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 AL121594.2-201ENST00000541658 472 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 AC005357.1-201ENST00000588399 301 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 AC140658.6-201ENST00000603958 201 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 AC013244.1-201ENST00000604279 193 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 AP000654.2-201ENST00000605633 586 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 AL031777.2-201ENST00000611953 196 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 AP004607.9-201ENST00000618202 316 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 uc_338.22-201ENST00000622722 187 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 AL732618.1-201ENST00000623251 301 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 Z69720.2-201ENST00000624755 279 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 LRRC37A6P-202ENST00000448648 5444 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 AC011493.1-201ENST00000596753 1632 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 OR4G1P-202ENST00000641173 1788 ntBASIC8.2□□□□□ -1.1
LRCH3Q96II8 BEND2-202ENST00000380033 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LRCH3Q96II8 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC8.2□□□□□ -1.1
LRCH3Q96II8 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LRCH3Q96II8 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LRCH3Q96II8 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LRCH3Q96II8 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LRCH3Q96II8 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LRCH3Q96II8 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LRCH3Q96II8 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LRCH3Q96II8 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LRCH3Q96II8 ODF3-202ENST00000342593 386 ntTSL 5 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 Y_RNA.197-201ENST00000364004 102 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 RNU12-2P-201ENST00000364789 156 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 SNORA19-201ENST00000384737 128 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 RNA5SP115-201ENST00000411160 107 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 NDUFB4P5-201ENST00000415445 361 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 RPL34P3-201ENST00000421454 338 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 BMS1P19-201ENST00000433925 393 ntBASIC8.19□□□□□ -1.1
LRCH3Q96II8 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC8.19□□□□□ -1.1
LRCH3Q96II8 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms