Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC074255.1-201ENST00000511259 501 ntBASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 AC136777.2-201ENST00000522979 358 ntBASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 MTND1P6-201ENST00000523621 946 ntBASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 C1DP5-201ENST00000525775 383 ntBASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 AP001357.1-201ENST00000586304 1053 ntBASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 AC025857.2-201ENST00000602711 238 ntBASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 AC126175.1-201ENST00000617041 758 ntBASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 AP005432.1-201ENST00000580891 3485 ntBASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 AC006484.1-201ENST00000435086 1884 ntBASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AC025470.1-201ENST00000510053 2032 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AC007842.1-201ENST00000597336 2039 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 SNORA17A-201ENST00000391185 133 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AL158827.1-201ENST00000416300 391 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 RNF10P1-201ENST00000418589 369 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 MTND4LP13-201ENST00000425022 298 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AL512661.1-201ENST00000434586 1253 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 MTCYBP29-201ENST00000436327 1006 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AC015983.1-201ENST00000441577 373 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AP000281.1-201ENST00000444036 316 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 EEF1B2P6-201ENST00000445713 673 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 NPM1P19-201ENST00000450070 712 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 CLIC4P1-201ENST00000453177 535 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 RPL5P13-201ENST00000462840 709 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 OR7E157P-201ENST00000494376 911 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AC109481.1-201ENST00000509173 282 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AC138701.1-201ENST00000524329 714 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 OR8Q1P-201ENST00000526467 655 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AC025918.2-201ENST00000558683 763 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 MIR4260-201ENST00000583107 67 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AC004477.3-201ENST00000614061 590 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 SNORA17.5-201ENST00000630429 132 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 AC079776.5-201ENST00000641920 211 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 HSPD1P7-201ENST00000447985 1686 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 MRE11P1-201ENST00000464884 2127 ntBASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CHMP4CQ96CF2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AL359715.3-201ENST00000569267 2123 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AC104964.3-201ENST00000606115 2860 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 SNORA51.1-201ENST00000363243 140 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 RNU6-31P-201ENST00000384388 108 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 PEX12P1-201ENST00000400284 1048 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AL662874.1-201ENST00000426065 230 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AC127526.2-201ENST00000426436 775 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 RNFT1P2-201ENST00000443064 757 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 RPS23P6-201ENST00000466136 431 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 AC116562.1-201ENST00000485355 781 ntBASIC6.85□□□□□ -1.31
CHMP4CQ96CF2 OR11I1P-201ENST00000486033 954 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms