Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
LMO3Q8TAP4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LMO3Q8TAP4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
LMO3Q8TAP4 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
LMO3Q8TAP4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
LMO3Q8TAP4 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LMO3Q8TAP4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
LMO3Q8TAP4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 MIR1182-201ENST00000408363 97 ntBASIC5.61□□□□□ -1.51
LMO3Q8TAP4 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AC108075.1-201ENST00000424692 529 ntBASIC5.61□□□□□ -1.51
LMO3Q8TAP4 VTI1BP4-201ENST00000427516 527 ntBASIC5.61□□□□□ -1.51
LMO3Q8TAP4 BX119904.3-201ENST00000428194 957 ntBASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AC009238.2-201ENST00000431026 355 ntBASIC5.61□□□□□ -1.51
LMO3Q8TAP4 MTCO3P43-201ENST00000440974 771 ntBASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AC021660.1-201ENST00000465006 554 ntBASIC5.61□□□□□ -1.51
LMO3Q8TAP4 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AC130360.2-201ENST00000533477 1556 ntBASIC5.61□□□□□ -1.51
LMO3Q8TAP4 TRIM51GP-201ENST00000534741 1350 ntBASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AC134349.2-201ENST00000535136 910 ntBASIC5.61□□□□□ -1.51
LMO3Q8TAP4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AL136520.1-202ENST00000555494 763 ntBASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AC138473.1-201ENST00000605717 526 ntBASIC5.61□□□□□ -1.51
LMO3Q8TAP4 AL139254.3-201ENST00000641097 674 ntBASIC5.61□□□□□ -1.51
LMO3Q8TAP4 CASC19-264ENST00000641912 1184 ntBASIC5.61□□□□□ -1.51
LMO3Q8TAP4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LMO3Q8TAP4 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AC011755.1-201ENST00000623763 2049 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 MAPK10-328ENST00000641553 4009 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 SNORA67-201ENST00000384423 137 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 OR8V1P-201ENST00000395193 873 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 RN7SKP59-201ENST00000410520 314 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 NPM1P4-201ENST00000414095 812 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 MRPS21P2-201ENST00000424704 264 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AL161722.2-201ENST00000434731 981 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 OR52B5P-201ENST00000435337 951 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 GAPDHP58-201ENST00000438477 1006 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 RPS11P7-201ENST00000442125 465 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AC090602.1-201ENST00000469695 252 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 RPS4XP1-201ENST00000482189 787 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 DEFB109A-201ENST00000482450 265 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 NIFKP7-201ENST00000503365 834 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AC097173.1-201ENST00000505862 819 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AC025857.1-201ENST00000525252 377 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AC006249.1-201ENST00000621223 471 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 OR52B5P-202ENST00000641118 1110 ntBASIC5.6□□□□□ -1.51
LMO3Q8TAP4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LMO3Q8TAP4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms