Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 THAP12P9-201ENST00000503971 2360 ntBASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC168Q8NDH2 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 SDAD1P1-202ENST00000524156 2051 ntBASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 CCT8P1-201ENST00000413611 1657 ntBASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 OR4K15-201ENST00000305051 1216 ntBASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 IGKV7-3-201ENST00000357453 298 ntBASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 AC090058.1-201ENST00000498788 435 ntBASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 MEMO1P5-201ENST00000604810 406 ntBASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 AC024941.1-201ENST00000612250 334 ntBASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 AL137141.1-201ENST00000624622 4836 ntBASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 XIST-206ENST00000434839 2865 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 OFD1P17-201ENST00000437639 3018 ntBASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 SNORA70F-201ENST00000384142 135 ntBASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 AP002530.1-201ENST00000405705 684 ntBASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 AC008280.1-201ENST00000418851 412 ntBASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 AP001781.1-201ENST00000530977 207 ntBASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 AL627230.1-201ENST00000613077 211 ntBASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 AL591926.8-201ENST00000616876 211 ntBASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC168Q8NDH2 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 RN7SKP95-201ENST00000362860 303 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 RPL7L1P8-201ENST00000469911 741 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AC010618.1-201ENST00000469924 477 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AC013356.1-201ENST00000489027 564 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AC133555.2-201ENST00000550213 292 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 VN1R85P-201ENST00000601587 426 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AC105254.2-201ENST00000603636 436 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AC004890.3-201ENST00000605566 1095 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 MAPK10-270ENST00000641102 3538 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AL121886.1-201ENST00000358609 435 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 MIR208A-201ENST00000362287 71 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AL049697.2-201ENST00000403708 294 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AL158073.1-201ENST00000426848 1104 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 RPS29P9-201ENST00000440360 171 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AL136455.1-201ENST00000441083 1240 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AC026688.1-201ENST00000520639 1168 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AC013731.1-201ENST00000604340 883 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 HSPD1P7-201ENST00000447985 1686 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 NCOA4P3-201ENST00000513203 1877 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AC112243.1-201ENST00000623949 3851 ntBASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC168Q8NDH2 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms