Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 SETP10-201ENST00000424368 814 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 AL589765.3-201ENST00000446084 462 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 RPL35AP19-201ENST00000469425 329 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 CBX1P5-201ENST00000475330 559 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 RN7SL717P-201ENST00000478343 297 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 AC058823.1-201ENST00000485315 474 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 ENPP7P11-201ENST00000505915 627 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 IMPA1P1-201ENST00000510718 842 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 AC016559.2-201ENST00000510759 359 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 AC092709.1-201ENST00000521355 1045 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 HMGB1P40-201ENST00000525121 540 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 AC090022.1-201ENST00000546569 311 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 AL589674.2-201ENST00000604304 337 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 AC026124.2-201ENST00000621847 656 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 SAMMSON-227ENST00000642114 1199 ntBASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TTC9CQ8N5M4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 AC011755.1-201ENST00000623763 2049 ntBASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 AC005294.1-201ENST00000355509 281 ntBASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 BMS1P3-201ENST00000372011 932 ntBASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 VDAC2P1-201ENST00000399358 958 ntBASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 PCNPP2-201ENST00000441651 455 ntBASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 UGT2A3P7-201ENST00000510485 734 ntBASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 AC130364.2-201ENST00000528639 604 ntBASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 SUGT1P3-202ENST00000604259 383 ntBASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 AC009597.2-201ENST00000604659 592 ntBASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 AL162431.4-201ENST00000604674 411 ntBASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 KARSP1-201ENST00000451871 1752 ntBASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
TTC9CQ8N5M4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
TTC9CQ8N5M4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TTC9CQ8N5M4 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.18□□□□□ -1.74
TTC9CQ8N5M4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.18□□□□□ -1.74
TTC9CQ8N5M4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TTC9CQ8N5M4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.18□□□□□ -1.74
TTC9CQ8N5M4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.18□□□□□ -1.74
TTC9CQ8N5M4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TTC9CQ8N5M4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
TTC9CQ8N5M4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
TTC9CQ8N5M4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms