Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 TMSB4XP2-201ENST00000335179 210 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 RNA5SP442-201ENST00000365050 107 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 RNU6-809P-201ENST00000384461 107 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 RN7SKP129-201ENST00000410288 299 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 MTND3P8-201ENST00000412909 339 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 SNRPFP1-201ENST00000414761 252 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC009237.9-201ENST00000414800 347 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 RPA2P2-201ENST00000419698 796 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 ELOCP4-201ENST00000420090 333 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC062016.2-201ENST00000420950 676 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC133104.1-201ENST00000429100 218 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 NANOGP6-201ENST00000429190 847 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AL353093.1-201ENST00000441292 436 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 RPL36AP55-201ENST00000454114 305 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC099563.1-201ENST00000456086 418 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 CHIAP1-201ENST00000456220 995 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC023194.1-201ENST00000493084 308 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 OR7E99P-201ENST00000505750 922 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 OR7E83P-201ENST00000511021 970 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC117383.2-201ENST00000514722 322 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC087241.2-201ENST00000535801 324 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC034105.3-201ENST00000565294 442 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 SNX29P2-204ENST00000603801 875 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 FXYD6P1-201ENST00000604857 285 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 U47924.1-201ENST00000606539 434 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC113361.1-201ENST00000606683 543 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 HMGB1P24-202ENST00000615653 685 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC073488.8-201ENST00000631952 757 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 AC009831.5-201ENST00000624000 3189 ntBASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 PSG5-202ENST00000366175 1766 ntTSL 5 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.94□□□□□ -1.14
SCUBE3Q8IX30 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 AC009948.5-201ENST00000624360 4406 ntBASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 AC016831.3-201ENST00000446451 1723 ntBASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 OR5J1P-201ENST00000313544 939 ntBASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 RNU6-359P-201ENST00000365466 108 ntBASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 Y_RNA.445-201ENST00000384168 102 ntBASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 ISY1-202ENST00000393292 988 ntTSL 5 BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 SNORA2C-201ENST00000408564 137 ntBASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 SPA17P1-201ENST00000416656 452 ntBASIC7.93□□□□□ -1.14
SCUBE3Q8IX30 MTCO2P27-201ENST00000420740 428 ntBASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms