Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RN7SKP153-201ENST00000365026 316 ntBASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 RPL12P9-201ENST00000412942 488 ntBASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 AL596448.1-201ENST00000415024 392 ntBASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 AC104333.2-201ENST00000422630 192 ntBASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 SRSF1P1-201ENST00000424058 520 ntBASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 AC124944.2-201ENST00000429866 1242 ntBASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 AP000942.1-201ENST00000463969 747 ntBASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 HMGB1P44-201ENST00000508597 572 ntBASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 EIF3KP3-201ENST00000514461 639 ntBASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 AC022360.1-201ENST00000521058 340 ntBASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 AC010547.6-201ENST00000571789 193 ntBASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 AC107993.1-201ENST00000591343 684 ntBASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 AC116158.1-201ENST00000560231 2129 ntBASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC50Q8IVM0 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AL672167.1-204ENST00000641875 3017 ntBASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AC007738.1-201ENST00000413892 348 ntBASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 Z68694.1-201ENST00000413929 841 ntBASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 NPM1P22-201ENST00000427761 952 ntBASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AC092447.2-201ENST00000435487 669 ntBASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AC002504.1-201ENST00000438281 691 ntBASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AC073109.1-201ENST00000445066 978 ntBASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AC105399.1-202ENST00000447303 205 ntBASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 RN7SL51P-201ENST00000468230 285 ntBASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 RPL7P41-201ENST00000485823 957 ntBASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 MIR4505-201ENST00000582238 73 ntBASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AC060766.1-201ENST00000590824 627 ntBASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AL122125.1-201ENST00000616999 600 ntBASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AC015871.5-202ENST00000623252 701 ntBASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 CU639417.4-201ENST00000623928 207 ntBASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 MAPK10-286ENST00000641208 8747 ntBASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CCDC50Q8IVM0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 SCN1A-220ENST00000641603 12506 ntBASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 RNA5SP284-201ENST00000384547 118 ntBASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 MIR621-201ENST00000384919 96 ntBASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 AL133388.1-201ENST00000404509 287 ntBASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 BMS1P17-202ENST00000416720 316 ntBASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 AL031584.1-201ENST00000447169 754 ntBASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 AC007998.1-201ENST00000474156 672 ntBASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 AC058823.1-201ENST00000485315 474 ntBASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 RN7SL423P-201ENST00000486202 304 ntBASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 RPL15P21-201ENST00000495592 567 ntBASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 RN7SKP46-201ENST00000515942 234 ntBASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 AC022826.1-201ENST00000519383 805 ntBASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 AC100784.1-201ENST00000522790 310 ntBASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC50Q8IVM0 MIR6839-201ENST00000620425 113 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms