Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.89□□□□□ -1.63
RFX4Q33E94 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.89□□□□□ -1.63
RFX4Q33E94 AC129915.3-201ENST00000634128 948 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 SOCS5P3-201ENST00000425115 1576 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RFX4Q33E94 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
RFX4Q33E94 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFX4Q33E94 SCN1A-220ENST00000641603 12506 ntBASIC4.89□□□□□ -1.63
RFX4Q33E94 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RFX4Q33E94 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.89□□□□□ -1.63
RFX4Q33E94 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.89□□□□□ -1.63
RFX4Q33E94 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFX4Q33E94 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RFX4Q33E94 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFX4Q33E94 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
RFX4Q33E94 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.88□□□□□ -1.63
RFX4Q33E94 SAMMSON-213ENST00000641336 1521 ntBASIC4.88□□□□□ -1.63
RFX4Q33E94 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.88□□□□□ -1.63
RFX4Q33E94 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RFX4Q33E94 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFX4Q33E94 YES1P1-201ENST00000418510 1628 ntBASIC4.88□□□□□ -1.63
RFX4Q33E94 AC107977.1-201ENST00000355745 939 ntBASIC4.88□□□□□ -1.63
RFX4Q33E94 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFX4Q33E94 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.88□□□□□ -1.63
RFX4Q33E94 AC012519.1-201ENST00000424588 610 ntBASIC4.88□□□□□ -1.63
RFX4Q33E94 CDY8P-201ENST00000428380 1279 ntBASIC4.88□□□□□ -1.63
RFX4Q33E94 AL161722.2-201ENST00000434731 981 ntBASIC4.88□□□□□ -1.63
RFX4Q33E94 NOP56P2-201ENST00000447491 769 ntBASIC4.88□□□□□ -1.63
RFX4Q33E94 CDY20P-201ENST00000447528 1279 ntBASIC4.88□□□□□ -1.63
RFX4Q33E94 LDHBP2-201ENST00000456969 1005 ntBASIC4.88□□□□□ -1.63
RFX4Q33E94 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.88□□□□□ -1.63
RFX4Q33E94 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
RFX4Q33E94 RN7SL591P-201ENST00000496150 292 ntBASIC4.88□□□□□ -1.63
RFX4Q33E94 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.88□□□□□ -1.63
RFX4Q33E94 AC006499.4-201ENST00000510947 694 ntBASIC4.88□□□□□ -1.63
RFX4Q33E94 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.88□□□□□ -1.63
RFX4Q33E94 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.88□□□□□ -1.63
RFX4Q33E94 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.88□□□□□ -1.63
RFX4Q33E94 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.88□□□□□ -1.63
RFX4Q33E94 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.88□□□□□ -1.63
RFX4Q33E94 RN7SL708P-201ENST00000580952 299 ntBASIC4.88□□□□□ -1.63
RFX4Q33E94 AC134669.1-201ENST00000581275 672 ntBASIC4.88□□□□□ -1.63
RFX4Q33E94 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.88□□□□□ -1.63
RFX4Q33E94 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.88□□□□□ -1.63
RFX4Q33E94 AC012616.1-201ENST00000600294 197 ntBASIC4.88□□□□□ -1.63
RFX4Q33E94 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.88□□□□□ -1.63
RFX4Q33E94 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.88□□□□□ -1.63
RFX4Q33E94 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
RFX4Q33E94 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RFX4Q33E94 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RFX4Q33E94 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RFX4Q33E94 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
RFX4Q33E94 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.87□□□□□ -1.63
RFX4Q33E94 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 OR52B3P-201ENST00000314715 928 ntBASIC4.87□□□□□ -1.63
RFX4Q33E94 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 CXADRP1-201ENST00000398098 1095 ntBASIC4.87□□□□□ -1.63
RFX4Q33E94 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 AL662874.1-201ENST00000426065 230 ntBASIC4.87□□□□□ -1.63
RFX4Q33E94 DNAJA1P5-201ENST00000440278 943 ntBASIC4.87□□□□□ -1.63
RFX4Q33E94 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.87□□□□□ -1.63
RFX4Q33E94 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.87□□□□□ -1.63
RFX4Q33E94 AL445665.1-202ENST00000452436 324 ntBASIC4.87□□□□□ -1.63
RFX4Q33E94 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 RNU7-157P-201ENST00000459600 66 ntBASIC4.87□□□□□ -1.63
RFX4Q33E94 GYG1P1-201ENST00000460864 698 ntBASIC4.87□□□□□ -1.63
RFX4Q33E94 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.87□□□□□ -1.63
RFX4Q33E94 RN7SL447P-201ENST00000494711 245 ntBASIC4.87□□□□□ -1.63
RFX4Q33E94 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.87□□□□□ -1.63
RFX4Q33E94 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.87□□□□□ -1.63
RFX4Q33E94 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.87□□□□□ -1.63
RFX4Q33E94 AC079600.1-201ENST00000550326 297 ntBASIC4.87□□□□□ -1.63
RFX4Q33E94 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
RFX4Q33E94 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.87□□□□□ -1.63
RFX4Q33E94 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.87□□□□□ -1.63
RFX4Q33E94 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.87□□□□□ -1.63
RFX4Q33E94 AL499605.1-201ENST00000604628 403 ntBASIC4.87□□□□□ -1.63
RFX4Q33E94 AC108865.2-201ENST00000606881 432 ntBASIC4.87□□□□□ -1.63
RFX4Q33E94 AL096712.1-201ENST00000614561 159 ntBASIC4.87□□□□□ -1.63
RFX4Q33E94 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.87□□□□□ -1.63
RFX4Q33E94 CXADRP3-202ENST00000617265 1100 ntBASIC4.87□□□□□ -1.63
RFX4Q33E94 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.87□□□□□ -1.63
RFX4Q33E94 MIR193BHG-214ENST00000641765 509 ntBASIC4.87□□□□□ -1.63
RFX4Q33E94 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.87□□□□□ -1.63
RFX4Q33E94 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 NAMPTP1-201ENST00000440465 2514 ntBASIC4.87□□□□□ -1.63
RFX4Q33E94 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RFX4Q33E94 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
RFX4Q33E94 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms