Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AL591623.2-201ENST00000449978 222 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 HMGB1P7-201ENST00000450921 612 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN1BQ07699 RN7SL254P-201ENST00000460609 284 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 CABYRP1-201ENST00000465493 1045 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AC098847.1-201ENST00000473094 348 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.02□□□□□ -1.61
SCN1BQ07699 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN1BQ07699 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 RN7SL612P-201ENST00000497704 295 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 RPS17P5-201ENST00000498293 408 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AC010627.1-201ENST00000503819 1294 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN1BQ07699 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN1BQ07699 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AC137627.1-201ENST00000545761 289 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN1BQ07699 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN1BQ07699 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN1BQ07699 SMIM12P1-201ENST00000603004 274 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 OR4H6P-202ENST00000603819 340 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 ELOCP34-201ENST00000604436 327 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AC090525.3-201ENST00000605601 189 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AC073137.1-201ENST00000605636 634 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.02□□□□□ -1.61
SCN1BQ07699 uc_338.29-201ENST00000615099 168 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 FAM27E2-201ENST00000619668 403 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN1BQ07699 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.02□□□□□ -1.61
SCN1BQ07699 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 AC083899.1-201ENST00000454465 3819 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AC079097.1-201ENST00000512187 1399 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SCN1BQ07699 AC025574.1-201ENST00000554784 1653 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SCN1BQ07699 AC104964.3-201ENST00000606115 2860 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 AP004607.3-201ENST00000530354 3915 ntBASIC5.02□□□□□ -1.61
SCN1BQ07699 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN1BQ07699 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN1BQ07699 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.01□□□□□ -1.61
SCN1BQ07699 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SCN1BQ07699 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN1BQ07699 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.01□□□□□ -1.61
SCN1BQ07699 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.01□□□□□ -1.61
SCN1BQ07699 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN1BQ07699 AC104260.2-201ENST00000623551 3497 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN1BQ07699 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN1BQ07699 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SCN1BQ07699 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SCN1BQ07699 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN1BQ07699 RN7SKP250-201ENST00000363924 321 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 GCNT1P4-201ENST00000404096 329 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
SCN1BQ07699 UBE2V1P15-201ENST00000407776 448 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.01□□□□□ -1.61
SCN1BQ07699 THEM7P-201ENST00000419556 672 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.01□□□□□ -1.61
SCN1BQ07699 AC099782.1-201ENST00000425889 474 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 RPS26P47-201ENST00000427219 348 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 AL160175.1-201ENST00000428124 247 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.01□□□□□ -1.61
SCN1BQ07699 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.01□□□□□ -1.61
SCN1BQ07699 MTCO1P52-201ENST00000433928 531 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 AC023141.3-201ENST00000436698 278 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 AL353662.1-201ENST00000439099 327 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 PPIAP7-201ENST00000454070 489 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 AC005229.2-201ENST00000456995 399 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 RPL7P48-201ENST00000461513 746 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 AC005912.1-201ENST00000495392 255 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.01□□□□□ -1.61
SCN1BQ07699 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.01□□□□□ -1.61
SCN1BQ07699 AP000620.1-201ENST00000527147 504 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 OR4A41P-201ENST00000533053 928 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 NANOGNBP2-201ENST00000544753 553 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.01□□□□□ -1.61
SCN1BQ07699 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SCN1BQ07699 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.01□□□□□ -1.61
SCN1BQ07699 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.01□□□□□ -1.61
SCN1BQ07699 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.01□□□□□ -1.61
SCN1BQ07699 RN7SL290P-201ENST00000578661 300 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 CBX3P2-202ENST00000583365 535 ntBASIC5.01□□□□□ -1.61
SCN1BQ07699 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms