Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC092474.3-201ENST00000603022 568 ntBASIC5.36□□□□□ -1.55
CDK3Q00526 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDK3Q00526 AC074101.1-201ENST00000637861 241 ntBASIC5.36□□□□□ -1.55
CDK3Q00526 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDK3Q00526 AC079776.5-201ENST00000641920 211 ntBASIC5.36□□□□□ -1.55
CDK3Q00526 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CDK3Q00526 SAMM50P1-201ENST00000455403 1399 ntBASIC5.36□□□□□ -1.55
CDK3Q00526 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDK3Q00526 MSL3P1-202ENST00000440028 1468 ntBASIC5.36□□□□□ -1.55
CDK3Q00526 AL590763.1-201ENST00000398297 1545 ntBASIC5.36□□□□□ -1.55
CDK3Q00526 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDK3Q00526 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
CDK3Q00526 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDK3Q00526 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDK3Q00526 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDK3Q00526 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDK3Q00526 AC138907.8-201ENST00000623981 2256 ntBASIC5.36□□□□□ -1.55
CDK3Q00526 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.36□□□□□ -1.55
CDK3Q00526 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDK3Q00526 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.35□□□□□ -1.55
CDK3Q00526 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 MTND5P23-201ENST00000430812 1655 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK3Q00526 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.35□□□□□ -1.55
CDK3Q00526 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.35□□□□□ -1.55
CDK3Q00526 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK3Q00526 SETP10-201ENST00000424368 814 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK3Q00526 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK3Q00526 AL138787.1-202ENST00000437804 898 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 GAPDHP25-201ENST00000447061 1001 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.35□□□□□ -1.55
CDK3Q00526 CCRL1P1-201ENST00000449542 1053 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 MYO5BP2-201ENST00000449815 1277 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.35□□□□□ -1.55
CDK3Q00526 RN7SL172P-201ENST00000460535 303 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 AC026348.1-201ENST00000462549 1053 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 PSAT1P4-201ENST00000466500 526 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 RN7SL799P-201ENST00000475891 298 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 RPS21P4-201ENST00000487122 248 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 AC090543.1-201ENST00000492168 485 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK3Q00526 GLUD1P3-202ENST00000508551 200 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.35□□□□□ -1.55
CDK3Q00526 AC067904.2-201ENST00000517322 1283 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 CDC42P3-201ENST00000518493 633 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK3Q00526 AP004607.2-201ENST00000533949 322 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CDK3Q00526 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.35□□□□□ -1.55
CDK3Q00526 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.35□□□□□ -1.55
CDK3Q00526 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
CDK3Q00526 MIMT1-201ENST00000597105 1050 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 RPL21P136-201ENST00000605378 396 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 SDR42E1P1-201ENST00000611327 477 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 RMST_5.1-201ENST00000618704 126 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 AL133370.2-201ENST00000619934 439 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 AC073869.8-201ENST00000641806 335 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CDK3Q00526 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CDK3Q00526 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDK3Q00526 AL353796.1-201ENST00000561542 3241 ntBASIC5.35□□□□□ -1.55
CDK3Q00526 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CDK3Q00526 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDK3Q00526 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDK3Q00526 AC083899.1-201ENST00000454465 3819 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.34□□□□□ -1.55
CDK3Q00526 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.34□□□□□ -1.55
CDK3Q00526 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK3Q00526 AC006206.1-201ENST00000544842 3387 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 DDX6P1-205ENST00000441966 1436 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDK3Q00526 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK3Q00526 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.34□□□□□ -1.55
CDK3Q00526 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDK3Q00526 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDK3Q00526 SNORA67-201ENST00000384423 137 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 MIR223-201ENST00000385204 110 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 RNU1-149P-201ENST00000390870 161 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDK3Q00526 CCNB2P1-201ENST00000399411 1150 ntBASIC5.34□□□□□ -1.55
CDK3Q00526 OR4K12P-201ENST00000406538 961 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms