Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.38□□□□□ -1.55
CBX1P83916 AC025283.1-201ENST00000572039 734 ntBASIC5.38□□□□□ -1.55
CBX1P83916 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.38□□□□□ -1.55
CBX1P83916 CCDC58P1-201ENST00000578567 430 ntBASIC5.38□□□□□ -1.55
CBX1P83916 RN7SL32P-201ENST00000580514 281 ntBASIC5.38□□□□□ -1.55
CBX1P83916 MIR212-201ENST00000586026 110 ntBASIC5.38□□□□□ -1.55
CBX1P83916 AC068726.1-201ENST00000610993 341 ntBASIC5.38□□□□□ -1.55
CBX1P83916 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CBX1P83916 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.38□□□□□ -1.55
CBX1P83916 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CBX1P83916 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CBX1P83916 Z98755.1-201ENST00000407015 1384 ntBASIC5.38□□□□□ -1.55
CBX1P83916 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CBX1P83916 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CBX1P83916 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.37□□□□□ -1.55
CBX1P83916 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CBX1P83916 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.37□□□□□ -1.55
CBX1P83916 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CBX1P83916 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.37□□□□□ -1.55
CBX1P83916 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CBX1P83916 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.37□□□□□ -1.55
CBX1P83916 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CBX1P83916 AL672167.2-201ENST00000377164 879 ntBASIC5.37□□□□□ -1.55
CBX1P83916 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CBX1P83916 ATG4AP1-201ENST00000416893 538 ntBASIC5.37□□□□□ -1.55
CBX1P83916 VN1R3-201ENST00000418822 919 ntBASIC5.37□□□□□ -1.55
CBX1P83916 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.37□□□□□ -1.55
CBX1P83916 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.37□□□□□ -1.55
CBX1P83916 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.37□□□□□ -1.55
CBX1P83916 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.37□□□□□ -1.55
CBX1P83916 TUBB4BP6-201ENST00000437576 479 ntBASIC5.37□□□□□ -1.55
CBX1P83916 AL356121.1-201ENST00000442911 156 ntBASIC5.37□□□□□ -1.55
CBX1P83916 TRIM60P16-201ENST00000444048 694 ntBASIC5.37□□□□□ -1.55
CBX1P83916 AL590004.3-202ENST00000445883 451 ntBASIC5.37□□□□□ -1.55
CBX1P83916 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.37□□□□□ -1.55
CBX1P83916 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.37□□□□□ -1.55
CBX1P83916 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CBX1P83916 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.37□□□□□ -1.55
CBX1P83916 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.37□□□□□ -1.55
CBX1P83916 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
CBX1P83916 RPL32P33-201ENST00000487023 394 ntBASIC5.37□□□□□ -1.55
CBX1P83916 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.37□□□□□ -1.55
CBX1P83916 AC015524.1-201ENST00000491585 472 ntBASIC5.37□□□□□ -1.55
CBX1P83916 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.37□□□□□ -1.55
CBX1P83916 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.37□□□□□ -1.55
CBX1P83916 AC008126.1-201ENST00000549019 480 ntBASIC5.37□□□□□ -1.55
CBX1P83916 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.37□□□□□ -1.55
CBX1P83916 AP005136.2-201ENST00000583253 1049 ntBASIC5.37□□□□□ -1.55
CBX1P83916 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.37□□□□□ -1.55
CBX1P83916 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.37□□□□□ -1.55
CBX1P83916 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.37□□□□□ -1.55
CBX1P83916 AL008729.2-201ENST00000606393 473 ntBASIC5.37□□□□□ -1.55
CBX1P83916 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.37□□□□□ -1.55
CBX1P83916 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.37□□□□□ -1.55
CBX1P83916 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.37□□□□□ -1.55
CBX1P83916 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CBX1P83916 CASC19-206ENST00000641028 1430 ntBASIC5.37□□□□□ -1.55
CBX1P83916 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CBX1P83916 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CBX1P83916 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CBX1P83916 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CBX1P83916 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
CBX1P83916 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CBX1P83916 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.37□□□□□ -1.55
CBX1P83916 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CBX1P83916 AC016588.2-201ENST00000632484 3021 ntBASIC5.37□□□□□ -1.55
CBX1P83916 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
CBX1P83916 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.36□□□□□ -1.55
CBX1P83916 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.36□□□□□ -1.55
CBX1P83916 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CBX1P83916 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CBX1P83916 AL159987.1-201ENST00000347911 293 ntBASIC5.36□□□□□ -1.55
CBX1P83916 RNU1-134P-201ENST00000362935 165 ntBASIC5.36□□□□□ -1.55
CBX1P83916 RNU1-20P-201ENST00000363314 162 ntBASIC5.36□□□□□ -1.55
CBX1P83916 RNA5SP77-201ENST00000365394 120 ntBASIC5.36□□□□□ -1.55
CBX1P83916 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CBX1P83916 SUGT1P2-201ENST00000379452 992 ntBASIC5.36□□□□□ -1.55
CBX1P83916 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CBX1P83916 LAP3P1-201ENST00000403648 294 ntBASIC5.36□□□□□ -1.55
CBX1P83916 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.36□□□□□ -1.55
CBX1P83916 EIF4EP1-201ENST00000422311 642 ntBASIC5.36□□□□□ -1.55
CBX1P83916 AC004448.2-201ENST00000422360 586 ntBASIC5.36□□□□□ -1.55
CBX1P83916 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.36□□□□□ -1.55
CBX1P83916 AKR1B10P1-201ENST00000425765 942 ntBASIC5.36□□□□□ -1.55
CBX1P83916 AC069285.2-201ENST00000440210 275 ntBASIC5.36□□□□□ -1.55
CBX1P83916 AL031681.1-201ENST00000443304 400 ntBASIC5.36□□□□□ -1.55
CBX1P83916 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.36□□□□□ -1.55
CBX1P83916 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.36□□□□□ -1.55
CBX1P83916 RPL5P30-201ENST00000465511 891 ntBASIC5.36□□□□□ -1.55
CBX1P83916 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.36□□□□□ -1.55
CBX1P83916 AC113367.2-201ENST00000505749 160 ntBASIC5.36□□□□□ -1.55
CBX1P83916 AP001960.1-201ENST00000506494 658 ntBASIC5.36□□□□□ -1.55
CBX1P83916 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.36□□□□□ -1.55
CBX1P83916 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.36□□□□□ -1.55
CBX1P83916 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.36□□□□□ -1.55
CBX1P83916 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CBX1P83916 AL049830.4-201ENST00000555149 351 ntBASIC5.36□□□□□ -1.55
CBX1P83916 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.36□□□□□ -1.55
CBX1P83916 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.36□□□□□ -1.55
CBX1P83916 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms