Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL139148.1-201ENST00000427122 680 ntBASIC5.08□□□□□ -1.6
VSX2P58304 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.08□□□□□ -1.6
VSX2P58304 FTLP19-201ENST00000433300 394 ntBASIC5.08□□□□□ -1.6
VSX2P58304 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.08□□□□□ -1.6
VSX2P58304 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.08□□□□□ -1.6
VSX2P58304 RN7SL799P-201ENST00000475891 298 ntBASIC5.08□□□□□ -1.6
VSX2P58304 AC079841.1-201ENST00000481228 950 ntBASIC5.08□□□□□ -1.6
VSX2P58304 HMGN1P9-201ENST00000515212 298 ntBASIC5.08□□□□□ -1.6
VSX2P58304 RNA5SP373-201ENST00000517271 95 ntBASIC5.08□□□□□ -1.6
VSX2P58304 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.08□□□□□ -1.6
VSX2P58304 NMNAT1P5-201ENST00000559657 841 ntBASIC5.08□□□□□ -1.6
VSX2P58304 AC108738.1-201ENST00000603703 237 ntBASIC5.08□□□□□ -1.6
VSX2P58304 AC006363.1-201ENST00000603806 463 ntBASIC5.08□□□□□ -1.6
VSX2P58304 OR51C1P-201ENST00000608504 942 ntBASIC5.08□□□□□ -1.6
VSX2P58304 AC126915.2-201ENST00000610957 190 ntBASIC5.08□□□□□ -1.6
VSX2P58304 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VSX2P58304 AP003400.3-201ENST00000624904 346 ntBASIC5.08□□□□□ -1.6
VSX2P58304 AC099654.6-201ENST00000636487 512 ntBASIC5.08□□□□□ -1.6
VSX2P58304 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VSX2P58304 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VSX2P58304 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VSX2P58304 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VSX2P58304 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
VSX2P58304 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.07□□□□□ -1.6
VSX2P58304 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
VSX2P58304 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.07□□□□□ -1.6
VSX2P58304 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.07□□□□□ -1.6
VSX2P58304 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
VSX2P58304 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.07□□□□□ -1.6
VSX2P58304 RNU6-673P-201ENST00000365084 104 ntBASIC5.07□□□□□ -1.6
VSX2P58304 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.07□□□□□ -1.6
VSX2P58304 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.07□□□□□ -1.6
VSX2P58304 CNOT7P2-201ENST00000441051 832 ntBASIC5.07□□□□□ -1.6
VSX2P58304 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.07□□□□□ -1.6
VSX2P58304 GAPDHP14-201ENST00000450472 937 ntBASIC5.07□□□□□ -1.6
VSX2P58304 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VSX2P58304 RPS18P6-201ENST00000476880 458 ntBASIC5.07□□□□□ -1.6
VSX2P58304 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.07□□□□□ -1.6
VSX2P58304 RPL7P6-201ENST00000480903 738 ntBASIC5.07□□□□□ -1.6
VSX2P58304 IGBP1P4-201ENST00000503202 879 ntBASIC5.07□□□□□ -1.6
VSX2P58304 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.07□□□□□ -1.6
VSX2P58304 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.07□□□□□ -1.6
VSX2P58304 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
VSX2P58304 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.07□□□□□ -1.6
VSX2P58304 OR10G5P-201ENST00000532733 358 ntBASIC5.07□□□□□ -1.6
VSX2P58304 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.07□□□□□ -1.6
VSX2P58304 AC127381.1-201ENST00000555979 939 ntBASIC5.07□□□□□ -1.6
VSX2P58304 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.07□□□□□ -1.6
VSX2P58304 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.07□□□□□ -1.6
VSX2P58304 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.07□□□□□ -1.6
VSX2P58304 AL139041.1-201ENST00000605480 610 ntBASIC5.07□□□□□ -1.6
VSX2P58304 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.07□□□□□ -1.6
VSX2P58304 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.07□□□□□ -1.6
VSX2P58304 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
VSX2P58304 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VSX2P58304 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VSX2P58304 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.07□□□□□ -1.6
VSX2P58304 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
VSX2P58304 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
VSX2P58304 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
VSX2P58304 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VSX2P58304 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VSX2P58304 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
VSX2P58304 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
VSX2P58304 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VSX2P58304 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VSX2P58304 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.06□□□□□ -1.6
VSX2P58304 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VSX2P58304 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VSX2P58304 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VSX2P58304 MIR105-2-201ENST00000385083 81 ntBASIC5.06□□□□□ -1.6
VSX2P58304 DUTP5-201ENST00000406790 469 ntBASIC5.06□□□□□ -1.6
VSX2P58304 GNG5P5-201ENST00000420444 220 ntBASIC5.06□□□□□ -1.6
VSX2P58304 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.06□□□□□ -1.6
VSX2P58304 AL627308.1-201ENST00000435693 821 ntBASIC5.06□□□□□ -1.6
VSX2P58304 AL136455.1-201ENST00000441083 1240 ntBASIC5.06□□□□□ -1.6
VSX2P58304 AC008953.1-201ENST00000497334 318 ntBASIC5.06□□□□□ -1.6
VSX2P58304 RPS4XP20-201ENST00000505751 772 ntBASIC5.06□□□□□ -1.6
VSX2P58304 AC006499.3-201ENST00000506077 748 ntBASIC5.06□□□□□ -1.6
VSX2P58304 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.06□□□□□ -1.6
VSX2P58304 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VSX2P58304 AC021733.2-201ENST00000518830 497 ntBASIC5.06□□□□□ -1.6
VSX2P58304 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.06□□□□□ -1.6
VSX2P58304 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.06□□□□□ -1.6
VSX2P58304 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.06□□□□□ -1.6
VSX2P58304 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.06□□□□□ -1.6
VSX2P58304 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VSX2P58304 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VSX2P58304 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.06□□□□□ -1.6
VSX2P58304 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VSX2P58304 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VSX2P58304 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VSX2P58304 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.06□□□□□ -1.6
VSX2P58304 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.06□□□□□ -1.6
VSX2P58304 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VSX2P58304 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
VSX2P58304 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VSX2P58304 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VSX2P58304 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.05□□□□□ -1.6
VSX2P58304 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms