Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.57□□□□□ -1.52
SUMO3P55854 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.57□□□□□ -1.52
SUMO3P55854 AC122718.2-201ENST00000505325 591 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 AC112484.3-201ENST00000505910 329 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.57□□□□□ -1.52
SUMO3P55854 AC108471.1-201ENST00000513977 287 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 RN7SKP248-201ENST00000516278 305 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 MTCO3P15-201ENST00000526563 574 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 MTATP6P15-201ENST00000527233 835 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 UBTFL10-201ENST00000528532 562 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 OR5AM1P-201ENST00000532136 1032 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.57□□□□□ -1.52
SUMO3P55854 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.57□□□□□ -1.52
SUMO3P55854 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SUMO3P55854 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.57□□□□□ -1.52
SUMO3P55854 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SUMO3P55854 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.57□□□□□ -1.52
SUMO3P55854 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.57□□□□□ -1.52
SUMO3P55854 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
SUMO3P55854 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.57□□□□□ -1.52
SUMO3P55854 EIF1P6-201ENST00000600054 334 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.57□□□□□ -1.52
SUMO3P55854 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.57□□□□□ -1.52
SUMO3P55854 VN1R7P-201ENST00000619242 903 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SUMO3P55854 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SUMO3P55854 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SUMO3P55854 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SUMO3P55854 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SUMO3P55854 AC016583.1-201ENST00000624221 2431 ntBASIC5.57□□□□□ -1.52
SUMO3P55854 POMP-202ENST00000460403 1428 ntTSL 3 BASIC5.57□□□□□ -1.52
SUMO3P55854 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.56□□□□□ -1.52
SUMO3P55854 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.56□□□□□ -1.52
SUMO3P55854 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SUMO3P55854 AC007342.5-201ENST00000571340 2142 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 AC016745.2-201ENST00000608834 3443 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SUMO3P55854 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SUMO3P55854 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
SUMO3P55854 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SUMO3P55854 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SUMO3P55854 MTCO2P31-201ENST00000402702 684 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.56□□□□□ -1.52
SUMO3P55854 AL354707.3-201ENST00000427308 331 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.56□□□□□ -1.52
SUMO3P55854 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.56□□□□□ -1.52
SUMO3P55854 AP000936.3-201ENST00000438127 255 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 AC009263.1-201ENST00000441193 1239 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.56□□□□□ -1.52
SUMO3P55854 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.56□□□□□ -1.52
SUMO3P55854 AC097463.1-201ENST00000447288 481 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 OTX2P1-201ENST00000450956 354 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SUMO3P55854 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.56□□□□□ -1.52
SUMO3P55854 AC012123.2-201ENST00000485809 248 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 RPL23AP40-201ENST00000487630 390 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.56□□□□□ -1.52
SUMO3P55854 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.56□□□□□ -1.52
SUMO3P55854 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.56□□□□□ -1.52
SUMO3P55854 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.56□□□□□ -1.52
SUMO3P55854 AC018797.1-201ENST00000510791 255 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 CR383658.1-201ENST00000514609 734 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.56□□□□□ -1.52
SUMO3P55854 snoZ278.1-201ENST00000517059 112 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.56□□□□□ -1.52
SUMO3P55854 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.56□□□□□ -1.52
SUMO3P55854 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.56□□□□□ -1.52
SUMO3P55854 BCAS2P1-201ENST00000528022 632 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.56□□□□□ -1.52
SUMO3P55854 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.56□□□□□ -1.52
SUMO3P55854 AC023050.2-201ENST00000544968 387 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 NPM1P47-201ENST00000560843 856 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.56□□□□□ -1.52
SUMO3P55854 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.56□□□□□ -1.52
SUMO3P55854 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.56□□□□□ -1.52
SUMO3P55854 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SUMO3P55854 MTCO1P40-201ENST00000574371 625 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 MTND3P13-201ENST00000574391 343 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 MIR4675-201ENST00000577898 77 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.56□□□□□ -1.52
SUMO3P55854 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.56□□□□□ -1.52
SUMO3P55854 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.56□□□□□ -1.52
SUMO3P55854 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.56□□□□□ -1.52
SUMO3P55854 MIR6889-201ENST00000613185 59 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 AP001052.1-201ENST00000626421 99 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.56□□□□□ -1.52
SUMO3P55854 AC073488.6-201ENST00000632293 754 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 AC073869.7-201ENST00000640874 297 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SUMO3P55854 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SUMO3P55854 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.56□□□□□ -1.52
SUMO3P55854 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.56□□□□□ -1.52
SUMO3P55854 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
SUMO3P55854 AC068769.1-201ENST00000474767 2426 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 AC022325.1-201ENST00000502748 2199 ntBASIC5.56□□□□□ -1.52
SUMO3P55854 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SUMO3P55854 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SUMO3P55854 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
SUMO3P55854 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
SUMO3P55854 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms