Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF144AP50876 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF144AP50876 COX4I1P1-201ENST00000554239 509 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC7.08□□□□□ -1.28
RNF144AP50876 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC7.08□□□□□ -1.28
RNF144AP50876 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF144AP50876 AC019322.1-201ENST00000571869 389 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.08□□□□□ -1.28
RNF144AP50876 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF144AP50876 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC7.08□□□□□ -1.28
RNF144AP50876 AL451049.1-201ENST00000608672 497 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 AC068831.8-201ENST00000620171 435 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC7.08□□□□□ -1.28
RNF144AP50876 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF144AP50876 NMD3P1-201ENST00000439704 1488 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 AC024560.2-201ENST00000507981 1497 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 AC241584.2-201ENST00000637142 2090 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RNF144AP50876 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF144AP50876 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF144AP50876 CKAP2P1-201ENST00000555477 2049 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF144AP50876 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF144AP50876 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
RNF144AP50876 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF144AP50876 AL591543.1-202ENST00000642095 4149 ntBASIC7.08□□□□□ -1.28
RNF144AP50876 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF144AP50876 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF144AP50876 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
RNF144AP50876 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF144AP50876 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
RNF144AP50876 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF144AP50876 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF144AP50876 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.07□□□□□ -1.28
RNF144AP50876 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF144AP50876 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC7.07□□□□□ -1.28
RNF144AP50876 RNU6-619P-201ENST00000365146 108 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 LST1-211ENST00000376110 433 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF144AP50876 CUBN-201ENST00000377823 705 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF144AP50876 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF144AP50876 SNORA35-201ENST00000386104 128 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 IGKV3-15-201ENST00000390252 442 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RNF144AP50876 Y_RNA.579-201ENST00000390939 94 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 KRT18P52-201ENST00000404956 846 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AL356967.1-201ENST00000406305 431 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF144AP50876 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF144AP50876 OR51A3P-201ENST00000413596 924 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 CRIP1P3-201ENST00000416794 220 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 MTCO3P46-201ENST00000425787 232 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AC073335.1-201ENST00000427776 363 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF144AP50876 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF144AP50876 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
RNF144AP50876 RPL35P8-201ENST00000433284 337 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AL512882.1-201ENST00000436086 832 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 RPL7P29-201ENST00000437151 728 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF144AP50876 AC016691.1-201ENST00000441321 413 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF144AP50876 AC007000.1-201ENST00000453064 794 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF144AP50876 AC103563.5-201ENST00000455643 364 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 Y_RNA.631-201ENST00000459607 101 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF144AP50876 RPSAP48-201ENST00000466509 889 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AC023194.1-201ENST00000493084 308 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AC112204.1-201ENST00000502591 103 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AC109811.2-201ENST00000509609 452 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AC048346.1-201ENST00000510247 144 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC7.07□□□□□ -1.28
RNF144AP50876 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC7.07□□□□□ -1.28
RNF144AP50876 MAL2-203ENST00000534619 578 ntTSL 4 BASIC7.07□□□□□ -1.28
RNF144AP50876 TRAV15-201ENST00000556680 249 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF144AP50876 AC110588.1-201ENST00000559699 137 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AC034105.3-201ENST00000565294 442 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF144AP50876 MIR3689F-201ENST00000579617 66 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AC016629.2-201ENST00000597341 199 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AC008638.3-201ENST00000603341 463 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 SNRPGP17-201ENST00000603780 214 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AL451085.1-201ENST00000604546 690 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AL161734.1-201ENST00000609720 557 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF144AP50876 BANCR-201ENST00000624238 473 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF144AP50876 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF144AP50876 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF144AP50876 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
RNF144AP50876 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF144AP50876 RPL36AP21-202ENST00000639134 430 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF144AP50876 AP003119.3-201ENST00000566747 4192 ntBASIC7.07□□□□□ -1.28
RNF144AP50876 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
RNF144AP50876 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms