Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC005341.1-201ENST00000571086 708 ntBASIC5.21□□□□□ -1.58
SLC6A12P48065 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC6A12P48065 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SLC6A12P48065 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SLC6A12P48065 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.21□□□□□ -1.58
SLC6A12P48065 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC6A12P48065 AC010245.2-201ENST00000606908 1167 ntBASIC5.21□□□□□ -1.58
SLC6A12P48065 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC6A12P48065 AC092953.2-201ENST00000608000 699 ntBASIC5.21□□□□□ -1.58
SLC6A12P48065 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
SLC6A12P48065 AL691477.1-201ENST00000624398 162 ntBASIC5.21□□□□□ -1.58
SLC6A12P48065 AP000720.1-201ENST00000625091 483 ntBASIC5.21□□□□□ -1.58
SLC6A12P48065 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC6A12P48065 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC6A12P48065 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SLC6A12P48065 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SLC6A12P48065 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC6A12P48065 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC6A12P48065 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC6A12P48065 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.58
SLC6A12P48065 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
SLC6A12P48065 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.21□□□□□ -1.58
SLC6A12P48065 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC6A12P48065 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC6A12P48065 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC6A12P48065 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
SLC6A12P48065 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC6A12P48065 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
SLC6A12P48065 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SLC6A12P48065 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SLC6A12P48065 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.21□□□□□ -1.58
SLC6A12P48065 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC6A12P48065 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC6A12P48065 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A12P48065 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
SLC6A12P48065 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
SLC6A12P48065 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A12P48065 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.2□□□□□ -1.58
SLC6A12P48065 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A12P48065 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC6A12P48065 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A12P48065 MTCO1P15-201ENST00000529569 1526 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SLC6A12P48065 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A12P48065 RNA5SP319-201ENST00000362768 119 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 RNU4-23P-201ENST00000362839 140 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC6A12P48065 MIR143-201ENST00000385300 106 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 AL133388.1-201ENST00000404509 287 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC6A12P48065 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC6A12P48065 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A12P48065 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 RPL35AP19-201ENST00000469425 329 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 CBX1P5-201ENST00000475330 559 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC6A12P48065 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC6A12P48065 RN7SL466P-201ENST00000497546 295 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC6A12P48065 AC098976.1-201ENST00000513014 541 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC6A12P48065 RNU6-319P-201ENST00000516025 108 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC6A12P48065 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.2□□□□□ -1.58
SLC6A12P48065 AC022404.1-201ENST00000555320 273 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC6A12P48065 TMF1P1-201ENST00000576058 373 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 AC027216.1-201ENST00000577726 685 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.2□□□□□ -1.58
SLC6A12P48065 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC6A12P48065 AC009027.1-201ENST00000604510 479 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 FAM72A-208ENST00000607379 1139 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 MIR6768-201ENST00000610734 72 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 AC073575.2-201ENST00000614212 627 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.2□□□□□ -1.58
SLC6A12P48065 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A12P48065 AC074140.1-201ENST00000621617 208 ntBASIC5.2□□□□□ -1.58
SLC6A12P48065 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A12P48065 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.2□□□□□ -1.58
SLC6A12P48065 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A12P48065 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A12P48065 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.2□□□□□ -1.58
SLC6A12P48065 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
SLC6A12P48065 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
SLC6A12P48065 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A12P48065 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SLC6A12P48065 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A12P48065 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A12P48065 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A12P48065 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A12P48065 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC6A12P48065 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC6A12P48065 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A12P48065 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SLC6A12P48065 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A12P48065 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SLC6A12P48065 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SLC6A12P48065 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC6A12P48065 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC6A12P48065 OR9G4-201ENST00000302957 984 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms