Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRCC3P46736 AC023421.1-201ENST00000590535 1785 ntBASIC5.58□□□□□ -1.52
BRCC3P46736 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRCC3P46736 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BRCC3P46736 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
BRCC3P46736 MIR133A2-201ENST00000347538 102 ntBASIC5.58□□□□□ -1.52
BRCC3P46736 RNA5SP455-201ENST00000365190 119 ntBASIC5.58□□□□□ -1.52
BRCC3P46736 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRCC3P46736 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRCC3P46736 NUDT19P3-201ENST00000404698 555 ntBASIC5.58□□□□□ -1.52
BRCC3P46736 MIR1182-201ENST00000408363 97 ntBASIC5.58□□□□□ -1.52
BRCC3P46736 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.58□□□□□ -1.52
BRCC3P46736 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BRCC3P46736 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.58□□□□□ -1.52
BRCC3P46736 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BRCC3P46736 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BRCC3P46736 VN1R54P-201ENST00000435210 1049 ntBASIC5.58□□□□□ -1.52
BRCC3P46736 RPS29P10-201ENST00000439197 166 ntBASIC5.58□□□□□ -1.52
BRCC3P46736 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.58□□□□□ -1.52
BRCC3P46736 NOP56P2-201ENST00000447491 769 ntBASIC5.58□□□□□ -1.52
BRCC3P46736 DNAJB5P1-201ENST00000454004 806 ntBASIC5.58□□□□□ -1.52
BRCC3P46736 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.58□□□□□ -1.52
BRCC3P46736 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.58□□□□□ -1.52
BRCC3P46736 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.58□□□□□ -1.52
BRCC3P46736 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.58□□□□□ -1.52
BRCC3P46736 OR8Q1P-201ENST00000526467 655 ntBASIC5.58□□□□□ -1.52
BRCC3P46736 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.58□□□□□ -1.52
BRCC3P46736 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.58□□□□□ -1.52
BRCC3P46736 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.58□□□□□ -1.52
BRCC3P46736 AC008814.1-201ENST00000603797 406 ntBASIC5.58□□□□□ -1.52
BRCC3P46736 AC093799.2-201ENST00000610062 578 ntBASIC5.58□□□□□ -1.52
BRCC3P46736 AC005618.4-201ENST00000625053 554 ntBASIC5.58□□□□□ -1.52
BRCC3P46736 AC132825.8-201ENST00000640783 297 ntBASIC5.58□□□□□ -1.52
BRCC3P46736 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRCC3P46736 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.58□□□□□ -1.52
BRCC3P46736 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.58□□□□□ -1.52
BRCC3P46736 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
BRCC3P46736 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.58□□□□□ -1.52
BRCC3P46736 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
BRCC3P46736 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
BRCC3P46736 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
BRCC3P46736 AC112255.1-201ENST00000624070 2493 ntBASIC5.57□□□□□ -1.52
BRCC3P46736 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
BRCC3P46736 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.57□□□□□ -1.52
BRCC3P46736 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
BRCC3P46736 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
BRCC3P46736 AC079298.1-201ENST00000625026 1619 ntBASIC5.57□□□□□ -1.52
BRCC3P46736 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
BRCC3P46736 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.57□□□□□ -1.52
BRCC3P46736 AC103591.2-201ENST00000265259 766 ntBASIC5.57□□□□□ -1.52
BRCC3P46736 RNA5SP123-201ENST00000363244 119 ntBASIC5.57□□□□□ -1.52
BRCC3P46736 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BRCC3P46736 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
BRCC3P46736 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.57□□□□□ -1.52
BRCC3P46736 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BRCC3P46736 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.57□□□□□ -1.52
BRCC3P46736 RHOT1P3-201ENST00000436571 331 ntBASIC5.57□□□□□ -1.52
BRCC3P46736 AC097484.1-201ENST00000471148 389 ntBASIC5.57□□□□□ -1.52
BRCC3P46736 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.57□□□□□ -1.52
BRCC3P46736 RPL7P41-201ENST00000485823 957 ntBASIC5.57□□□□□ -1.52
BRCC3P46736 AP000676.2-201ENST00000529711 301 ntBASIC5.57□□□□□ -1.52
BRCC3P46736 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
BRCC3P46736 AC016839.1-201ENST00000578162 867 ntBASIC5.57□□□□□ -1.52
BRCC3P46736 OOSP1P2-201ENST00000579644 351 ntBASIC5.57□□□□□ -1.52
BRCC3P46736 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.57□□□□□ -1.52
BRCC3P46736 LSM1P2-201ENST00000604911 322 ntBASIC5.57□□□□□ -1.52
BRCC3P46736 AL445528.2-201ENST00000620582 470 ntBASIC5.57□□□□□ -1.52
BRCC3P46736 AC135068.12-201ENST00000637370 931 ntBASIC5.57□□□□□ -1.52
BRCC3P46736 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.57□□□□□ -1.52
BRCC3P46736 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.57□□□□□ -1.52
BRCC3P46736 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
BRCC3P46736 AL034549.2-201ENST00000618285 3373 ntBASIC5.57□□□□□ -1.52
BRCC3P46736 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.57□□□□□ -1.52
BRCC3P46736 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.57□□□□□ -1.52
BRCC3P46736 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.57□□□□□ -1.52
BRCC3P46736 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
BRCC3P46736 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
BRCC3P46736 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
BRCC3P46736 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BRCC3P46736 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.56□□□□□ -1.52
BRCC3P46736 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.56□□□□□ -1.52
BRCC3P46736 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
BRCC3P46736 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.56□□□□□ -1.52
BRCC3P46736 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
BRCC3P46736 RN7SKP104-201ENST00000362605 328 ntBASIC5.56□□□□□ -1.52
BRCC3P46736 MIR585-201ENST00000384887 94 ntBASIC5.56□□□□□ -1.52
BRCC3P46736 OR8V1P-201ENST00000395193 873 ntBASIC5.56□□□□□ -1.52
BRCC3P46736 GJA6P-201ENST00000415117 1042 ntBASIC5.56□□□□□ -1.52
BRCC3P46736 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
BRCC3P46736 AC138761.5-201ENST00000433967 325 ntBASIC5.56□□□□□ -1.52
BRCC3P46736 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.56□□□□□ -1.52
BRCC3P46736 AC099670.2-201ENST00000435130 321 ntBASIC5.56□□□□□ -1.52
BRCC3P46736 AC090602.1-201ENST00000469695 252 ntBASIC5.56□□□□□ -1.52
BRCC3P46736 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.56□□□□□ -1.52
BRCC3P46736 AP000797.2-201ENST00000475768 606 ntBASIC5.56□□□□□ -1.52
BRCC3P46736 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.56□□□□□ -1.52
BRCC3P46736 AC136777.2-201ENST00000522979 358 ntBASIC5.56□□□□□ -1.52
BRCC3P46736 OR5AZ1P-201ENST00000527448 943 ntBASIC5.56□□□□□ -1.52
BRCC3P46736 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BRCC3P46736 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms