Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC104997.1-201ENST00000519761 717 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.42□□□□□ -1.54
HNF4AP41235 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 TRIM51DP-201ENST00000529746 596 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.42□□□□□ -1.54
HNF4AP41235 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.42□□□□□ -1.54
HNF4AP41235 IGBP1P1-201ENST00000554337 1009 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 HSPE1P2-201ENST00000554777 306 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 AP001496.3-201ENST00000580230 913 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.42□□□□□ -1.54
HNF4AP41235 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.42□□□□□ -1.54
HNF4AP41235 AL139124.1-201ENST00000609123 421 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.42□□□□□ -1.54
HNF4AP41235 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.42□□□□□ -1.54
HNF4AP41235 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HNF4AP41235 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HNF4AP41235 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HNF4AP41235 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HNF4AP41235 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.42□□□□□ -1.54
HNF4AP41235 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.42□□□□□ -1.54
HNF4AP41235 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.42□□□□□ -1.54
HNF4AP41235 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.42□□□□□ -1.54
HNF4AP41235 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.42□□□□□ -1.54
HNF4AP41235 MAPK10-338ENST00000641647 3362 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.42□□□□□ -1.54
HNF4AP41235 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HNF4AP41235 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HNF4AP41235 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.42□□□□□ -1.54
HNF4AP41235 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HNF4AP41235 CASC19-248ENST00000641674 1356 ntBASIC5.42□□□□□ -1.54
HNF4AP41235 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HNF4AP41235 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HNF4AP41235 AC083899.1-201ENST00000454465 3819 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HNF4AP41235 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.41□□□□□ -1.54
HNF4AP41235 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.41□□□□□ -1.54
HNF4AP41235 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HNF4AP41235 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HNF4AP41235 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
HNF4AP41235 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HNF4AP41235 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HNF4AP41235 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HNF4AP41235 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HNF4AP41235 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HNF4AP41235 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
HNF4AP41235 LINC01963-201ENST00000562038 3148 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 GAPDHP24-201ENST00000328713 983 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.41□□□□□ -1.54
HNF4AP41235 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HNF4AP41235 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.41□□□□□ -1.54
HNF4AP41235 AL009179.1-201ENST00000406085 265 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.41□□□□□ -1.54
HNF4AP41235 AL662874.1-201ENST00000426065 230 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 RPS29P14-201ENST00000431518 171 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.41□□□□□ -1.54
HNF4AP41235 EEF1B2P6-201ENST00000445713 673 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 AL589765.3-201ENST00000446084 462 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 AC099063.2-201ENST00000446360 662 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 IGBP1P3-201ENST00000447449 1000 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 RPL5P13-201ENST00000462840 709 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 AC007998.1-201ENST00000474156 672 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
HNF4AP41235 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.41□□□□□ -1.54
HNF4AP41235 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.41□□□□□ -1.54
HNF4AP41235 MTCYBP19-201ENST00000517463 1124 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 CYCSP22-201ENST00000517555 339 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.41□□□□□ -1.54
HNF4AP41235 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.41□□□□□ -1.54
HNF4AP41235 AC138832.1-201ENST00000522871 556 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 MRPS16P1-201ENST00000523462 412 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.41□□□□□ -1.54
HNF4AP41235 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.41□□□□□ -1.54
HNF4AP41235 OR5AM1P-201ENST00000532136 1032 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.41□□□□□ -1.54
HNF4AP41235 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.41□□□□□ -1.54
HNF4AP41235 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.41□□□□□ -1.54
HNF4AP41235 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.41□□□□□ -1.54
HNF4AP41235 DPPA2P4-201ENST00000563717 878 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.41□□□□□ -1.54
HNF4AP41235 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.41□□□□□ -1.54
HNF4AP41235 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.41□□□□□ -1.54
HNF4AP41235 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.41□□□□□ -1.54
HNF4AP41235 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.41□□□□□ -1.54
HNF4AP41235 AC005021.1-201ENST00000608730 355 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.41□□□□□ -1.54
HNF4AP41235 AL118556.2-201ENST00000614375 824 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.41□□□□□ -1.54
HNF4AP41235 AC138965.3-201ENST00000623875 498 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.41□□□□□ -1.54
HNF4AP41235 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.41□□□□□ -1.54
HNF4AP41235 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HNF4AP41235 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HNF4AP41235 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.41□□□□□ -1.54
HNF4AP41235 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
HNF4AP41235 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
HNF4AP41235 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HNF4AP41235 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HNF4AP41235 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.41□□□□□ -1.54
HNF4AP41235 AL031595.2-201ENST00000624215 19071 ntBASIC5.4□□□□□ -1.54
HNF4AP41235 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 412 ms