Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 BX119904.3-201ENST00000428194 957 ntBASIC4.42□□□□□ -1.7
COL8A2P25067 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.42□□□□□ -1.7
COL8A2P25067 RPL12P3-201ENST00000440080 396 ntBASIC4.42□□□□□ -1.7
COL8A2P25067 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.42□□□□□ -1.7
COL8A2P25067 AC092647.3-201ENST00000443044 633 ntBASIC4.42□□□□□ -1.7
COL8A2P25067 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.42□□□□□ -1.7
COL8A2P25067 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.42□□□□□ -1.7
COL8A2P25067 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.42□□□□□ -1.7
COL8A2P25067 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
COL8A2P25067 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.42□□□□□ -1.7
COL8A2P25067 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL8A2P25067 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL8A2P25067 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL8A2P25067 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL8A2P25067 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
COL8A2P25067 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.42□□□□□ -1.7
COL8A2P25067 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.42□□□□□ -1.7
COL8A2P25067 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.42□□□□□ -1.7
COL8A2P25067 AC002069.2-201ENST00000603580 883 ntBASIC4.42□□□□□ -1.7
COL8A2P25067 AC024940.4-201ENST00000605507 246 ntBASIC4.42□□□□□ -1.7
COL8A2P25067 AC015660.5-201ENST00000623238 564 ntBASIC4.42□□□□□ -1.7
COL8A2P25067 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
COL8A2P25067 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL8A2P25067 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL8A2P25067 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.42□□□□□ -1.7
COL8A2P25067 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
COL8A2P25067 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL8A2P25067 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL8A2P25067 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL8A2P25067 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.42□□□□□ -1.7
COL8A2P25067 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL8A2P25067 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
COL8A2P25067 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.42□□□□□ -1.7
COL8A2P25067 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL8A2P25067 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
COL8A2P25067 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL8A2P25067 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL8A2P25067 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
COL8A2P25067 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL8A2P25067 CASC19-281ENST00000642118 1554 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
COL8A2P25067 AC139426.3-201ENST00000605648 2059 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL8A2P25067 U3.3-201ENST00000362986 216 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 RNU4-4P-201ENST00000364588 130 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.41□□□□□ -1.7
COL8A2P25067 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COL8A2P25067 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL8A2P25067 HYALP1-201ENST00000417674 1279 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COL8A2P25067 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL8A2P25067 EI24P4-201ENST00000423683 1078 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.41□□□□□ -1.7
COL8A2P25067 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.41□□□□□ -1.7
COL8A2P25067 AC009784.1-201ENST00000426484 460 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 RPS4XP16-201ENST00000427198 791 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.41□□□□□ -1.7
COL8A2P25067 AL136231.1-201ENST00000429407 730 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.41□□□□□ -1.7
COL8A2P25067 RPS29P10-201ENST00000439197 166 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 RPL5P25-201ENST00000441148 775 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 AC023271.1-201ENST00000445936 1090 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.41□□□□□ -1.7
COL8A2P25067 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.41□□□□□ -1.7
COL8A2P25067 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.41□□□□□ -1.7
COL8A2P25067 AC020937.1-201ENST00000519677 1013 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.41□□□□□ -1.7
COL8A2P25067 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.41□□□□□ -1.7
COL8A2P25067 OOSP1P2-201ENST00000579644 351 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 MIR4646-201ENST00000580775 63 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.41□□□□□ -1.7
COL8A2P25067 AC011447.4-201ENST00000587562 111 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL8A2P25067 BNIP3P32-201ENST00000600015 554 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 AC108738.1-201ENST00000603703 237 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 AC135068.12-201ENST00000637370 931 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
COL8A2P25067 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.41□□□□□ -1.7
COL8A2P25067 AC079298.1-201ENST00000625026 1619 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL8A2P25067 AC131971.1-201ENST00000332881 1482 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL8A2P25067 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL8A2P25067 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL8A2P25067 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL8A2P25067 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COL8A2P25067 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL8A2P25067 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL8A2P25067 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL8A2P25067 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL8A2P25067 PANDAR-201ENST00000629595 1506 ntBASIC4.41□□□□□ -1.7
COL8A2P25067 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.4□□□□□ -1.7
COL8A2P25067 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL8A2P25067 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
COL8A2P25067 AC073429.2-201ENST00000569694 1444 ntBASIC4.4□□□□□ -1.7
COL8A2P25067 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.4□□□□□ -1.7
COL8A2P25067 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL8A2P25067 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.4□□□□□ -1.71
COL8A2P25067 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms