Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USF1P22415 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.63□□□□□ -1.67
USF1P22415 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
USF1P22415 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
USF1P22415 CDC27P2-201ENST00000425026 1922 ntBASIC4.62□□□□□ -1.67
USF1P22415 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
USF1P22415 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.62□□□□□ -1.67
USF1P22415 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
USF1P22415 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
USF1P22415 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
USF1P22415 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
USF1P22415 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
USF1P22415 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USF1P22415 RPL23P2-201ENST00000320371 421 ntBASIC4.62□□□□□ -1.67
USF1P22415 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.62□□□□□ -1.67
USF1P22415 SNORA67-201ENST00000384423 137 ntBASIC4.62□□□□□ -1.67
USF1P22415 AL645733.1-201ENST00000402250 217 ntBASIC4.62□□□□□ -1.67
USF1P22415 AL009179.1-201ENST00000406085 265 ntBASIC4.62□□□□□ -1.67
USF1P22415 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.62□□□□□ -1.67
USF1P22415 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.62□□□□□ -1.67
USF1P22415 RNF10P1-201ENST00000418589 369 ntBASIC4.62□□□□□ -1.67
USF1P22415 AL034379.1-201ENST00000423216 253 ntBASIC4.62□□□□□ -1.67
USF1P22415 AC005033.1-201ENST00000428904 813 ntBASIC4.62□□□□□ -1.67
USF1P22415 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.62□□□□□ -1.67
USF1P22415 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.62□□□□□ -1.67
USF1P22415 AC245047.2-201ENST00000441060 530 ntBASIC4.62□□□□□ -1.67
USF1P22415 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USF1P22415 RPS26P41-201ENST00000450370 284 ntBASIC4.62□□□□□ -1.67
USF1P22415 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.62□□□□□ -1.67
USF1P22415 SNORD125-201ENST00000459538 96 ntBASIC4.62□□□□□ -1.67
USF1P22415 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.62□□□□□ -1.67
USF1P22415 AC091544.1-201ENST00000484702 348 ntBASIC4.62□□□□□ -1.67
USF1P22415 RPS7P6-201ENST00000485777 579 ntBASIC4.62□□□□□ -1.67
USF1P22415 RN7SL808P-201ENST00000496066 299 ntBASIC4.62□□□□□ -1.67
USF1P22415 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.62□□□□□ -1.67
USF1P22415 RPEP1-201ENST00000504507 658 ntBASIC4.62□□□□□ -1.67
USF1P22415 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.62□□□□□ -1.67
USF1P22415 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.62□□□□□ -1.67
USF1P22415 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.62□□□□□ -1.67
USF1P22415 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.62□□□□□ -1.67
USF1P22415 OR4A46P-201ENST00000527255 933 ntBASIC4.62□□□□□ -1.67
USF1P22415 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.62□□□□□ -1.67
USF1P22415 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
USF1P22415 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.62□□□□□ -1.67
USF1P22415 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
USF1P22415 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.62□□□□□ -1.67
USF1P22415 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.62□□□□□ -1.67
USF1P22415 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.62□□□□□ -1.67
USF1P22415 RN7SL708P-201ENST00000580952 299 ntBASIC4.62□□□□□ -1.67
USF1P22415 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.62□□□□□ -1.67
USF1P22415 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.62□□□□□ -1.67
USF1P22415 AC087468.1-201ENST00000604365 630 ntBASIC4.62□□□□□ -1.67
USF1P22415 AL445222.1-201ENST00000607259 628 ntBASIC4.62□□□□□ -1.67
USF1P22415 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.62□□□□□ -1.67
USF1P22415 OR8G7P-201ENST00000616658 848 ntBASIC4.62□□□□□ -1.67
USF1P22415 AC090510.2-201ENST00000617465 629 ntBASIC4.62□□□□□ -1.67
USF1P22415 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.62□□□□□ -1.67
USF1P22415 AP002505.2-201ENST00000623585 696 ntBASIC4.62□□□□□ -1.67
USF1P22415 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
USF1P22415 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USF1P22415 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.62□□□□□ -1.67
USF1P22415 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
USF1P22415 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USF1P22415 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
USF1P22415 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
USF1P22415 MT-RNR2-201ENST00000387347 1559 ntBASIC4.61□□□□□ -1.67
USF1P22415 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
USF1P22415 NEAT1-202ENST00000501122 22743 ntBASIC4.61□□□□□ -1.67
USF1P22415 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
USF1P22415 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
USF1P22415 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
USF1P22415 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.61□□□□□ -1.67
USF1P22415 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.61□□□□□ -1.67
USF1P22415 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
USF1P22415 MIPEPP2-201ENST00000422560 1819 ntBASIC4.61□□□□□ -1.67
USF1P22415 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.61□□□□□ -1.67
USF1P22415 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
USF1P22415 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.61□□□□□ -1.67
USF1P22415 RNA5SP443-201ENST00000363083 132 ntBASIC4.61□□□□□ -1.67
USF1P22415 U8.4-201ENST00000363626 134 ntBASIC4.61□□□□□ -1.67
USF1P22415 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
USF1P22415 RNU6-167P-201ENST00000384292 106 ntBASIC4.61□□□□□ -1.67
USF1P22415 AL589994.1-201ENST00000404962 340 ntBASIC4.61□□□□□ -1.67
USF1P22415 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.61□□□□□ -1.67
USF1P22415 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.61□□□□□ -1.67
USF1P22415 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.61□□□□□ -1.67
USF1P22415 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.61□□□□□ -1.67
USF1P22415 TMEM183AP1-205ENST00000432739 290 ntBASIC4.61□□□□□ -1.67
USF1P22415 AC092106.1-201ENST00000444291 373 ntBASIC4.61□□□□□ -1.67
USF1P22415 RN7SL197P-201ENST00000466981 299 ntBASIC4.61□□□□□ -1.67
USF1P22415 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.61□□□□□ -1.67
USF1P22415 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.61□□□□□ -1.67
USF1P22415 IGLV3-24-201ENST00000517477 197 ntBASIC4.61□□□□□ -1.67
USF1P22415 HMGB1P40-201ENST00000525121 540 ntBASIC4.61□□□□□ -1.67
USF1P22415 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.61□□□□□ -1.67
USF1P22415 H3F3BP2-201ENST00000583907 357 ntBASIC4.61□□□□□ -1.67
USF1P22415 AC060766.1-201ENST00000590824 627 ntBASIC4.61□□□□□ -1.67
USF1P22415 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.61□□□□□ -1.67
USF1P22415 AC087763.1-201ENST00000603391 286 ntBASIC4.61□□□□□ -1.67
USF1P22415 AC024940.4-201ENST00000605507 246 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms