Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 RBM25-205ENST00000527432 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 SSFA2-203ENST00000409136 3610 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
COL9A1P20849 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 AL365217.1-201ENST00000398578 2436 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 RNU5E-1-201ENST00000362477 120 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 RNU6-777P-201ENST00000364265 104 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
COL9A1P20849 AL591416.1-201ENST00000404015 867 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 BTBD10P2-201ENST00000404779 676 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 MIR1266-201ENST00000408125 84 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 THEM7P-201ENST00000419556 672 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 AC009965.2-201ENST00000425328 970 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 AL160004.2-201ENST00000432935 350 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC8.06□□□□□ -1.12
COL9A1P20849 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC8.06□□□□□ -1.12
COL9A1P20849 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC8.06□□□□□ -1.12
COL9A1P20849 AC104058.1-201ENST00000448028 297 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC8.06□□□□□ -1.12
COL9A1P20849 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC8.06□□□□□ -1.12
COL9A1P20849 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC8.06□□□□□ -1.12
COL9A1P20849 AC099670.1-201ENST00000455141 783 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 AL122013.1-201ENST00000473054 801 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 RPL12P20-201ENST00000475538 479 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 AC083904.1-201ENST00000487828 231 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 RN7SL569P-201ENST00000494652 288 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 RN7SL516P-201ENST00000496127 297 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 RPSAP51-201ENST00000497462 645 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC8.06□□□□□ -1.12
COL9A1P20849 VN1R104P-201ENST00000505115 1009 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 AC091885.1-201ENST00000506658 268 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC8.06□□□□□ -1.12
COL9A1P20849 FAM206BP-201ENST00000510179 541 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC8.06□□□□□ -1.12
COL9A1P20849 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC8.06□□□□□ -1.12
COL9A1P20849 AC091982.1-201ENST00000518134 520 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 AC022616.6-201ENST00000520479 119 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC8.06□□□□□ -1.12
COL9A1P20849 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC8.06□□□□□ -1.12
COL9A1P20849 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC8.06□□□□□ -1.12
COL9A1P20849 AC142086.3-201ENST00000563896 802 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 MT1L-202ENST00000566367 78 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 TVP23CP2-201ENST00000571473 623 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 MIR5690-201ENST00000583739 73 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC8.06□□□□□ -1.12
COL9A1P20849 BX664608.1-201ENST00000610519 487 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 AL133351.5-201ENST00000612789 106 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 AC243773.3-201ENST00000613270 256 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 AC133104.2-201ENST00000615272 193 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 AC024580.1-201ENST00000623020 674 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC8.06□□□□□ -1.12
COL9A1P20849 AC026108.1-201ENST00000635444 547 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 AC046144.1-201ENST00000478559 1853 ntBASIC8.06□□□□□ -1.12
COL9A1P20849 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC8.06□□□□□ -1.12
COL9A1P20849 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC8.06□□□□□ -1.12
COL9A1P20849 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 SLC12A8-201ENST00000393469 3447 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
COL9A1P20849 LINC01258-201ENST00000512517 2059 ntTSL 2 BASIC8.06□□□□□ -1.12
COL9A1P20849 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
COL9A1P20849 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
COL9A1P20849 CARF-201ENST00000320443 5209 ntTSL 2 BASIC8.06□□□□□ -1.12
COL9A1P20849 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
COL9A1P20849 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC8.05□□□□□ -1.12
COL9A1P20849 SMG1P1-202ENST00000309865 4223 ntBASIC8.05□□□□□ -1.12
COL9A1P20849 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
COL9A1P20849 TARS-202ENST00000455217 2523 ntTSL 2 BASIC8.05□□□□□ -1.12
COL9A1P20849 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.05□□□□□ -1.12
COL9A1P20849 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL9A1P20849 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
COL9A1P20849 MTND5P19-201ENST00000424872 1794 ntBASIC8.05□□□□□ -1.12
COL9A1P20849 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL9A1P20849 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL9A1P20849 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC8.05□□□□□ -1.12
COL9A1P20849 OFD1P5Y-201ENST00000447585 2590 ntBASIC8.05□□□□□ -1.12
COL9A1P20849 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC8.05□□□□□ -1.12
COL9A1P20849 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL9A1P20849 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL9A1P20849 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
COL9A1P20849 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
COL9A1P20849 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
COL9A1P20849 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
COL9A1P20849 AL080285.1-201ENST00000404225 984 ntBASIC8.05□□□□□ -1.12
COL9A1P20849 RNU6-1304P-201ENST00000411374 106 ntBASIC8.05□□□□□ -1.12
COL9A1P20849 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC8.05□□□□□ -1.12
COL9A1P20849 METTL15P3-201ENST00000415522 1221 ntBASIC8.05□□□□□ -1.12
COL9A1P20849 AC092634.6-201ENST00000418558 192 ntBASIC8.05□□□□□ -1.12
COL9A1P20849 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC8.05□□□□□ -1.12
COL9A1P20849 AL669831.1-202ENST00000428504 417 ntBASIC8.05□□□□□ -1.12
COL9A1P20849 RPL34P6-201ENST00000432390 345 ntBASIC8.05□□□□□ -1.12
COL9A1P20849 GPR143P-201ENST00000434155 205 ntBASIC8.05□□□□□ -1.12
COL9A1P20849 AC093716.1-201ENST00000435923 377 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms