Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AL031864.2-201ENST00000498507 350 ntBASIC6.11□□□□□ -1.43
ATF4P18848 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC6.11□□□□□ -1.43
ATF4P18848 BNIP3P41-201ENST00000503774 571 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AC021678.1-201ENST00000505195 936 ntBASIC6.11□□□□□ -1.43
ATF4P18848 OR7E99P-201ENST00000505750 922 ntBASIC6.11□□□□□ -1.43
ATF4P18848 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.11□□□□□ -1.43
ATF4P18848 AC093815.1-201ENST00000508637 280 ntBASIC6.11□□□□□ -1.43
ATF4P18848 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC6.11□□□□□ -1.43
ATF4P18848 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC6.11□□□□□ -1.43
ATF4P18848 IGHV3-32-201ENST00000519182 355 ntBASIC6.11□□□□□ -1.43
ATF4P18848 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.11□□□□□ -1.43
ATF4P18848 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATF4P18848 OR6M2P-201ENST00000529831 871 ntBASIC6.11□□□□□ -1.43
ATF4P18848 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC6.11□□□□□ -1.43
ATF4P18848 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC6.11□□□□□ -1.43
ATF4P18848 AEBP2-207ENST00000541908 975 ntAPPRIS ALT2 TSL 3 BASIC6.11□□□□□ -1.43
ATF4P18848 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC6.11□□□□□ -1.43
ATF4P18848 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC6.11□□□□□ -1.43
ATF4P18848 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.11□□□□□ -1.43
ATF4P18848 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.11□□□□□ -1.43
ATF4P18848 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.11□□□□□ -1.43
ATF4P18848 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC6.11□□□□□ -1.43
ATF4P18848 ULK4P3-201ENST00000563895 440 ntBASIC6.11□□□□□ -1.43
ATF4P18848 SOD1P2-201ENST00000563903 451 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC6.11□□□□□ -1.43
ATF4P18848 APOOP5-202ENST00000564761 566 ntBASIC6.11□□□□□ -1.43
ATF4P18848 MT1L-202ENST00000566367 78 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC6.11□□□□□ -1.43
ATF4P18848 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC6.11□□□□□ -1.43
ATF4P18848 AC090912.1-201ENST00000578831 570 ntTSL 4 BASIC6.11□□□□□ -1.43
ATF4P18848 MIR4420-201ENST00000583944 77 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AC005771.1-201ENST00000585581 349 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC6.11□□□□□ -1.43
ATF4P18848 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.11□□□□□ -1.43
ATF4P18848 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC6.11□□□□□ -1.43
ATF4P18848 CARSP1-201ENST00000603171 889 ntBASIC6.11□□□□□ -1.43
ATF4P18848 MARK3P1-201ENST00000604796 643 ntBASIC6.11□□□□□ -1.43
ATF4P18848 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
ATF4P18848 AP000894.4-201ENST00000610185 483 ntBASIC6.11□□□□□ -1.43
ATF4P18848 RBM22P6-201ENST00000611682 867 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC6.11□□□□□ -1.43
ATF4P18848 AP000648.2-201ENST00000624182 404 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AL355480.4-201ENST00000626823 69 ntBASIC6.11□□□□□ -1.43
ATF4P18848 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC6.11□□□□□ -1.43
ATF4P18848 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.11□□□□□ -1.43
ATF4P18848 AC108724.2-201ENST00000634593 290 ntBASIC6.11□□□□□ -1.43
ATF4P18848 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.11□□□□□ -1.43
ATF4P18848 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC6.11□□□□□ -1.43
ATF4P18848 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ATF4P18848 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
ATF4P18848 SCOC-AS1-201ENST00000512692 1987 ntTSL 2 BASIC6.11□□□□□ -1.43
ATF4P18848 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ATF4P18848 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 AC133552.1-201ENST00000569988 4007 ntBASIC6.1□□□□□ -1.43
ATF4P18848 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.1□□□□□ -1.43
ATF4P18848 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.1□□□□□ -1.43
ATF4P18848 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.1□□□□□ -1.43
ATF4P18848 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
ATF4P18848 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 KYNUP2-201ENST00000582280 1329 ntBASIC6.1□□□□□ -1.43
ATF4P18848 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.1□□□□□ -1.43
ATF4P18848 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 FCAR-201ENST00000345937 608 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 RNU5F-6P-201ENST00000362979 116 ntBASIC6.1□□□□□ -1.43
ATF4P18848 FANK1-201ENST00000368689 522 ntTSL 3 BASIC6.1□□□□□ -1.43
ATF4P18848 SNORA30-201ENST00000384028 129 ntBASIC6.1□□□□□ -1.43
ATF4P18848 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC6.1□□□□□ -1.43
ATF4P18848 AL138807.1-201ENST00000400354 459 ntBASIC6.1□□□□□ -1.43
ATF4P18848 MTCYBP36-201ENST00000404146 440 ntBASIC6.1□□□□□ -1.43
ATF4P18848 VN1R8P-201ENST00000407739 893 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC019181.1-201ENST00000417151 310 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC6.1□□□□□ -1.43
ATF4P18848 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 RPS27AP7-201ENST00000422792 455 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC091390.2-201ENST00000432573 374 ntBASIC6.1□□□□□ -1.43
ATF4P18848 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC6.1□□□□□ -1.43
ATF4P18848 CLUHP5-201ENST00000438421 774 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AP002856.4-201ENST00000441638 569 ntTSL 4 BASIC6.1□□□□□ -1.43
ATF4P18848 GAGE12J-201ENST00000442437 541 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATF4P18848 CEACAMP9-201ENST00000442990 513 ntBASIC6.1□□□□□ -1.43
ATF4P18848 PSMA2-204ENST00000445517 683 ntTSL 2 BASIC6.1□□□□□ -1.43
ATF4P18848 ARL2BPP7-201ENST00000446421 490 ntBASIC6.1□□□□□ -1.43
ATF4P18848 REG1CP-206ENST00000447469 496 ntBASIC6.1□□□□□ -1.43
ATF4P18848 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC6.1□□□□□ -1.43
ATF4P18848 DBIL5P-202ENST00000453414 250 ntBASIC6.1□□□□□ -1.43
ATF4P18848 NDUFAF4P4-201ENST00000454883 502 ntBASIC6.1□□□□□ -1.43
ATF4P18848 BZW1P1-201ENST00000454901 1240 ntBASIC6.1□□□□□ -1.43
ATF4P18848 AC234771.3-201ENST00000454984 622 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms