Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AL359643.1-201ENST00000404109 423 ntBASIC4.56□□□□□ -1.68
ATF1P18846 AL133388.1-201ENST00000404509 287 ntBASIC4.56□□□□□ -1.68
ATF1P18846 U3.32-201ENST00000408116 212 ntBASIC4.56□□□□□ -1.68
ATF1P18846 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.56□□□□□ -1.68
ATF1P18846 RPS3P2-201ENST00000421346 701 ntBASIC4.56□□□□□ -1.68
ATF1P18846 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.56□□□□□ -1.68
ATF1P18846 AL389925.1-201ENST00000432257 728 ntBASIC4.56□□□□□ -1.68
ATF1P18846 HMGN1P2-201ENST00000445197 310 ntBASIC4.56□□□□□ -1.68
ATF1P18846 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.56□□□□□ -1.68
ATF1P18846 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.56□□□□□ -1.68
ATF1P18846 SEPT7P3-201ENST00000455017 621 ntBASIC4.56□□□□□ -1.68
ATF1P18846 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.56□□□□□ -1.68
ATF1P18846 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.56□□□□□ -1.68
ATF1P18846 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.56□□□□□ -1.68
ATF1P18846 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.56□□□□□ -1.68
ATF1P18846 YWHABP2-201ENST00000540201 713 ntBASIC4.56□□□□□ -1.68
ATF1P18846 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.56□□□□□ -1.68
ATF1P18846 RN7SL708P-201ENST00000580952 299 ntBASIC4.56□□□□□ -1.68
ATF1P18846 MIR4505-201ENST00000582238 73 ntBASIC4.56□□□□□ -1.68
ATF1P18846 AC018695.5-201ENST00000605872 315 ntBASIC4.56□□□□□ -1.68
ATF1P18846 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.56□□□□□ -1.68
ATF1P18846 AC108359.1-201ENST00000616451 1211 ntBASIC4.56□□□□□ -1.68
ATF1P18846 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.56□□□□□ -1.68
ATF1P18846 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
ATF1P18846 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.56□□□□□ -1.68
ATF1P18846 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.56□□□□□ -1.68
ATF1P18846 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATF1P18846 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ATF1P18846 CDC27P2-201ENST00000425026 1922 ntBASIC4.56□□□□□ -1.68
ATF1P18846 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATF1P18846 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF1P18846 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.55□□□□□ -1.68
ATF1P18846 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF1P18846 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF1P18846 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF1P18846 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.55□□□□□ -1.68
ATF1P18846 MTHFD2P5-201ENST00000320415 844 ntBASIC4.55□□□□□ -1.68
ATF1P18846 RN7SKP97-201ENST00000410966 333 ntBASIC4.55□□□□□ -1.68
ATF1P18846 PRUNEP1-201ENST00000425846 705 ntBASIC4.55□□□□□ -1.68
ATF1P18846 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.55□□□□□ -1.68
ATF1P18846 MRPL35P2-201ENST00000448009 511 ntBASIC4.55□□□□□ -1.68
ATF1P18846 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.55□□□□□ -1.68
ATF1P18846 RN7SL51P-201ENST00000468230 285 ntBASIC4.55□□□□□ -1.68
ATF1P18846 RPL5P22-201ENST00000480199 884 ntBASIC4.55□□□□□ -1.68
ATF1P18846 RPL7P40-201ENST00000481703 745 ntBASIC4.55□□□□□ -1.68
ATF1P18846 PSMA2P2-201ENST00000504319 686 ntBASIC4.55□□□□□ -1.68
ATF1P18846 RNA5SP303-201ENST00000516192 130 ntBASIC4.55□□□□□ -1.68
ATF1P18846 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.55□□□□□ -1.68
ATF1P18846 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.55□□□□□ -1.68
ATF1P18846 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.55□□□□□ -1.68
ATF1P18846 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.55□□□□□ -1.68
ATF1P18846 AC015720.2-201ENST00000567709 334 ntBASIC4.55□□□□□ -1.68
ATF1P18846 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.55□□□□□ -1.68
ATF1P18846 AC022106.2-201ENST00000620114 757 ntBASIC4.55□□□□□ -1.68
ATF1P18846 AC010809.3-201ENST00000621310 641 ntBASIC4.55□□□□□ -1.68
ATF1P18846 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
ATF1P18846 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF1P18846 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
ATF1P18846 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF1P18846 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.55□□□□□ -1.68
ATF1P18846 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
ATF1P18846 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF1P18846 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF1P18846 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.55□□□□□ -1.68
ATF1P18846 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.55□□□□□ -1.68
ATF1P18846 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF1P18846 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.55□□□□□ -1.68
ATF1P18846 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.55□□□□□ -1.68
ATF1P18846 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
ATF1P18846 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATF1P18846 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.55□□□□□ -1.68
ATF1P18846 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF1P18846 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ATF1P18846 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
ATF1P18846 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ATF1P18846 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
ATF1P18846 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
ATF1P18846 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATF1P18846 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.54□□□□□ -1.68
ATF1P18846 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.54□□□□□ -1.68
ATF1P18846 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
ATF1P18846 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATF1P18846 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATF1P18846 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATF1P18846 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
ATF1P18846 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.54□□□□□ -1.68
ATF1P18846 MIR133B-201ENST00000362210 119 ntBASIC4.54□□□□□ -1.68
ATF1P18846 RNA5SP319-201ENST00000362768 119 ntBASIC4.54□□□□□ -1.68
ATF1P18846 RN7SKP292-201ENST00000365522 317 ntBASIC4.54□□□□□ -1.68
ATF1P18846 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
ATF1P18846 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATF1P18846 CXADRP1-201ENST00000398098 1095 ntBASIC4.54□□□□□ -1.68
ATF1P18846 AC099535.1-201ENST00000408928 371 ntBASIC4.54□□□□□ -1.68
ATF1P18846 RNA5SP487-201ENST00000410186 122 ntBASIC4.54□□□□□ -1.68
ATF1P18846 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.54□□□□□ -1.68
ATF1P18846 OR6C64P-201ENST00000419708 825 ntBASIC4.54□□□□□ -1.68
ATF1P18846 AC013268.2-201ENST00000420753 337 ntBASIC4.54□□□□□ -1.68
ATF1P18846 RPL36AP10-201ENST00000421785 322 ntBASIC4.54□□□□□ -1.68
ATF1P18846 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATF1P18846 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms