Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.27□□□□□ -1.41
COL6A2P12110 RPL7AP69-201ENST00000595306 806 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 AL031985.2-201ENST00000600955 480 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 AC012175.1-201ENST00000603755 531 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 AC072039.2-201ENST00000608883 439 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.27□□□□□ -1.41
COL6A2P12110 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL6A2P12110 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL6A2P12110 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.27□□□□□ -1.41
COL6A2P12110 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.27□□□□□ -1.41
COL6A2P12110 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.27□□□□□ -1.41
COL6A2P12110 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL6A2P12110 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 SLC2A3P4-201ENST00000521259 1471 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC6.27□□□□□ -1.41
COL6A2P12110 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL6A2P12110 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL6A2P12110 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.27□□□□□ -1.41
COL6A2P12110 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL6A2P12110 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 AC096921.2-201ENST00000561507 1916 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
COL6A2P12110 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
COL6A2P12110 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.26□□□□□ -1.41
COL6A2P12110 PSG10P-201ENST00000501199 1500 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 Z95114.1-201ENST00000624264 14574 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.26□□□□□ -1.41
COL6A2P12110 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COL6A2P12110 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.26□□□□□ -1.41
COL6A2P12110 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COL6A2P12110 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
COL6A2P12110 RNU6-553P-201ENST00000364047 96 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
COL6A2P12110 AL672167.2-201ENST00000377164 879 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COL6A2P12110 AL021407.1-201ENST00000404531 386 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 CBX1P3-201ENST00000413296 527 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AL360013.1-201ENST00000419031 858 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AC004074.1-201ENST00000421810 1063 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AC016027.5-201ENST00000427227 210 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AC083862.1-201ENST00000427378 1242 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC6.26□□□□□ -1.41
COL6A2P12110 MTCO2P16-201ENST00000436962 677 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC6.26□□□□□ -1.41
COL6A2P12110 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 ELOCP8-201ENST00000439309 332 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AC002542.1-201ENST00000440683 193 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 COL11A2P1-205ENST00000441798 676 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 ELOCP15-201ENST00000442090 332 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.26□□□□□ -1.41
COL6A2P12110 AL356133.1-201ENST00000444762 372 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AL161722.1-201ENST00000446972 1032 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.26□□□□□ -1.41
COL6A2P12110 USP9YP10-201ENST00000454868 628 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC6.26□□□□□ -1.41
COL6A2P12110 RPL34P33-201ENST00000486062 334 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 AC080014.1-201ENST00000496877 1201 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 USP9YP5-201ENST00000511770 630 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 PRELID3BP4-201ENST00000515476 571 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.26□□□□□ -1.41
COL6A2P12110 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC6.26□□□□□ -1.41
COL6A2P12110 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.26□□□□□ -1.41
COL6A2P12110 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
COL6A2P12110 RPA2P3-201ENST00000533268 770 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.26□□□□□ -1.41
COL6A2P12110 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.26□□□□□ -1.41
COL6A2P12110 RPL3P13-201ENST00000550415 216 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.26□□□□□ -1.41
COL6A2P12110 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 TPRX1P1-201ENST00000557620 319 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.26□□□□□ -1.41
COL6A2P12110 AC012213.3-201ENST00000577199 777 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AC016839.1-201ENST00000578162 867 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.26□□□□□ -1.41
COL6A2P12110 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.26□□□□□ -1.41
COL6A2P12110 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.26□□□□□ -1.41
COL6A2P12110 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL6A2P12110 AP000811.1-201ENST00000603803 651 ntBASIC6.26□□□□□ -1.41
COL6A2P12110 AL163642.2-201ENST00000604722 1019 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 729.6 ms