Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.84□□□□□ -1.63
SFTPBP07988 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SFTPBP07988 GSTA12P-201ENST00000402398 508 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.84□□□□□ -1.63
SFTPBP07988 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.84□□□□□ -1.63
SFTPBP07988 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.84□□□□□ -1.63
SFTPBP07988 AL590806.1-201ENST00000415818 853 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.84□□□□□ -1.63
SFTPBP07988 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.84□□□□□ -1.63
SFTPBP07988 AC017019.1-201ENST00000426129 261 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.84□□□□□ -1.63
SFTPBP07988 MTCYBP29-201ENST00000436327 1006 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.84□□□□□ -1.63
SFTPBP07988 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.84□□□□□ -1.63
SFTPBP07988 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.84□□□□□ -1.63
SFTPBP07988 RPL5P13-201ENST00000462840 709 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.84□□□□□ -1.63
SFTPBP07988 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.84□□□□□ -1.63
SFTPBP07988 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.84□□□□□ -1.63
SFTPBP07988 AC074255.1-201ENST00000511259 501 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 HMGB1P47-201ENST00000511281 589 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 RNU6-760P-201ENST00000516078 97 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 AC026616.1-201ENST00000523157 525 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.84□□□□□ -1.63
SFTPBP07988 AC068993.1-201ENST00000546724 589 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 AC079600.1-201ENST00000550326 297 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.84□□□□□ -1.63
SFTPBP07988 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.84□□□□□ -1.63
SFTPBP07988 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
SFTPBP07988 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.84□□□□□ -1.63
SFTPBP07988 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.84□□□□□ -1.63
SFTPBP07988 AC005021.1-201ENST00000608730 355 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.84□□□□□ -1.63
SFTPBP07988 MIR6768-201ENST00000610734 72 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 AC107308.1-201ENST00000615897 301 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SFTPBP07988 AC074276.2-201ENST00000619891 348 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 AC127024.6-201ENST00000621598 424 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 AC022919.1-201ENST00000624979 626 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.84□□□□□ -1.63
SFTPBP07988 OR5AC4P-202ENST00000642086 985 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.84□□□□□ -1.63
SFTPBP07988 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SFTPBP07988 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SFTPBP07988 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.84□□□□□ -1.63
SFTPBP07988 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
SFTPBP07988 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.84□□□□□ -1.64
SFTPBP07988 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SFTPBP07988 AC068870.1-201ENST00000563737 2455 ntBASIC4.84□□□□□ -1.64
SFTPBP07988 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
SFTPBP07988 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SFTPBP07988 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SFTPBP07988 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
SFTPBP07988 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPBP07988 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
SFTPBP07988 UGT2B26P-201ENST00000508672 1613 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.83□□□□□ -1.64
SFTPBP07988 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SFTPBP07988 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.83□□□□□ -1.64
SFTPBP07988 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPBP07988 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.83□□□□□ -1.64
SFTPBP07988 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPBP07988 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPBP07988 AC005042.1-201ENST00000393397 800 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 AL589655.1-201ENST00000405398 482 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 AL512422.1-201ENST00000407033 553 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
SFTPBP07988 AL133482.1-201ENST00000415988 498 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.83□□□□□ -1.64
SFTPBP07988 AC022022.1-201ENST00000430304 178 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SFTPBP07988 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.83□□□□□ -1.64
SFTPBP07988 AC046176.1-201ENST00000435260 1170 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.83□□□□□ -1.64
SFTPBP07988 CALM1P2-201ENST00000452941 448 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 AL133244.1-201ENST00000456007 258 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPBP07988 RN7SL101P-201ENST00000496350 279 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.83□□□□□ -1.64
SFTPBP07988 RPS17P5-201ENST00000498293 408 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.83□□□□□ -1.64
SFTPBP07988 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.83□□□□□ -1.64
SFTPBP07988 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.83□□□□□ -1.64
SFTPBP07988 HMGN2P36-201ENST00000529541 409 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 AP000648.1-201ENST00000529682 397 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.83□□□□□ -1.64
SFTPBP07988 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.83□□□□□ -1.64
SFTPBP07988 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.83□□□□□ -1.64
SFTPBP07988 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.83□□□□□ -1.64
SFTPBP07988 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.83□□□□□ -1.64
SFTPBP07988 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
SFTPBP07988 AGGF1P7-201ENST00000562369 913 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.83□□□□□ -1.64
SFTPBP07988 MIR4260-201ENST00000583107 67 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPBP07988 AL031601.1-201ENST00000605702 394 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 AC109309.2-201ENST00000612597 332 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 AC073575.2-201ENST00000614212 627 ntBASIC4.83□□□□□ -1.64
SFTPBP07988 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SFTPBP07988 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms