Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL512624.1-201ENST00000613638 469 ntBASIC5.55□□□□□ -1.52
APOEP02649 AC026367.3-201ENST00000619032 590 ntBASIC5.55□□□□□ -1.52
APOEP02649 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.55□□□□□ -1.52
APOEP02649 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.55□□□□□ -1.52
APOEP02649 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.55□□□□□ -1.52
APOEP02649 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOEP02649 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.55□□□□□ -1.52
APOEP02649 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOEP02649 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.55□□□□□ -1.52
APOEP02649 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
APOEP02649 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
APOEP02649 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
APOEP02649 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.54□□□□□ -1.52
APOEP02649 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.54□□□□□ -1.52
APOEP02649 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
APOEP02649 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
APOEP02649 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.54□□□□□ -1.52
APOEP02649 AC003973.3-201ENST00000624863 2822 ntBASIC5.54□□□□□ -1.52
APOEP02649 OR55B1P-203ENST00000641518 2602 ntBASIC5.54□□□□□ -1.52
APOEP02649 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
APOEP02649 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.54□□□□□ -1.52
APOEP02649 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
APOEP02649 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.54□□□□□ -1.52
APOEP02649 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.54□□□□□ -1.52
APOEP02649 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
APOEP02649 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
APOEP02649 OR4K12P-201ENST00000406538 961 ntBASIC5.54□□□□□ -1.52
APOEP02649 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.54□□□□□ -1.52
APOEP02649 AC093655.2-201ENST00000425735 631 ntBASIC5.54□□□□□ -1.52
APOEP02649 RPL7AP49-201ENST00000429522 581 ntBASIC5.54□□□□□ -1.52
APOEP02649 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
APOEP02649 AL591438.1-201ENST00000433508 581 ntBASIC5.54□□□□□ -1.52
APOEP02649 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.54□□□□□ -1.52
APOEP02649 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.54□□□□□ -1.52
APOEP02649 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.54□□□□□ -1.52
APOEP02649 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
APOEP02649 AP000797.2-201ENST00000475768 606 ntBASIC5.54□□□□□ -1.52
APOEP02649 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
APOEP02649 IGBP1P4-201ENST00000503202 879 ntBASIC5.54□□□□□ -1.52
APOEP02649 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.54□□□□□ -1.52
APOEP02649 SUMO2P4-201ENST00000504193 276 ntBASIC5.54□□□□□ -1.52
APOEP02649 PGAM1P13-201ENST00000507497 754 ntBASIC5.54□□□□□ -1.52
APOEP02649 HMGN1P9-201ENST00000515212 298 ntBASIC5.54□□□□□ -1.52
APOEP02649 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.54□□□□□ -1.52
APOEP02649 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.54□□□□□ -1.52
APOEP02649 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.54□□□□□ -1.52
APOEP02649 AC130364.2-201ENST00000528639 604 ntBASIC5.54□□□□□ -1.52
APOEP02649 DPRXP4-201ENST00000578053 568 ntBASIC5.54□□□□□ -1.52
APOEP02649 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.54□□□□□ -1.52
APOEP02649 AC069307.1-201ENST00000602820 447 ntBASIC5.54□□□□□ -1.52
APOEP02649 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.54□□□□□ -1.52
APOEP02649 AL139407.1-201ENST00000613826 1175 ntBASIC5.54□□□□□ -1.52
APOEP02649 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.54□□□□□ -1.52
APOEP02649 AP003400.3-201ENST00000624904 346 ntBASIC5.54□□□□□ -1.52
APOEP02649 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.54□□□□□ -1.52
APOEP02649 CYP4F35P-202ENST00000636121 390 ntBASIC5.54□□□□□ -1.52
APOEP02649 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
APOEP02649 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
APOEP02649 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
APOEP02649 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
APOEP02649 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
APOEP02649 PABPC1P6-201ENST00000445594 1829 ntBASIC5.53□□□□□ -1.52
APOEP02649 CR788268.1-201ENST00000603931 1809 ntBASIC5.53□□□□□ -1.52
APOEP02649 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
APOEP02649 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
APOEP02649 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.53□□□□□ -1.52
APOEP02649 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
APOEP02649 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.53□□□□□ -1.52
APOEP02649 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.53□□□□□ -1.52
APOEP02649 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.53□□□□□ -1.52
APOEP02649 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
APOEP02649 AC079298.1-201ENST00000625026 1619 ntBASIC5.53□□□□□ -1.52
APOEP02649 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
APOEP02649 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
APOEP02649 RNU1-19P-201ENST00000363306 165 ntBASIC5.53□□□□□ -1.52
APOEP02649 MIR223-201ENST00000385204 110 ntBASIC5.53□□□□□ -1.52
APOEP02649 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.53□□□□□ -1.52
APOEP02649 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.53□□□□□ -1.52
APOEP02649 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.53□□□□□ -1.52
APOEP02649 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
APOEP02649 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.53□□□□□ -1.52
APOEP02649 AC016772.1-201ENST00000444170 1261 ntBASIC5.53□□□□□ -1.52
APOEP02649 AC090804.1-201ENST00000448870 490 ntBASIC5.53□□□□□ -1.52
APOEP02649 AC104634.1-201ENST00000452720 462 ntBASIC5.53□□□□□ -1.52
APOEP02649 AC079168.1-201ENST00000458741 345 ntBASIC5.53□□□□□ -1.52
APOEP02649 RN7SL172P-201ENST00000460535 303 ntBASIC5.53□□□□□ -1.52
APOEP02649 RPS21P4-201ENST00000487122 248 ntBASIC5.53□□□□□ -1.52
APOEP02649 AC022133.1-201ENST00000490961 571 ntBASIC5.53□□□□□ -1.52
APOEP02649 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.53□□□□□ -1.52
APOEP02649 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.53□□□□□ -1.52
APOEP02649 AC092709.1-201ENST00000521355 1045 ntBASIC5.53□□□□□ -1.52
APOEP02649 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.53□□□□□ -1.52
APOEP02649 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.53□□□□□ -1.52
APOEP02649 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.53□□□□□ -1.52
APOEP02649 NMNAT1P5-201ENST00000559657 841 ntBASIC5.53□□□□□ -1.52
APOEP02649 MIR1269B-201ENST00000580405 75 ntBASIC5.53□□□□□ -1.52
APOEP02649 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
APOEP02649 AC092944.2-201ENST00000605443 889 ntBASIC5.53□□□□□ -1.52
APOEP02649 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.53□□□□□ -1.52
APOEP02649 BNIP3P41-202ENST00000616656 861 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms