Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.2□□□□□ -1.58
NKX2-2O95096 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX2-2O95096 H3F3BP2-201ENST00000583907 357 ntBASIC5.2□□□□□ -1.58
NKX2-2O95096 BNIP3P39-201ENST00000601077 554 ntBASIC5.2□□□□□ -1.58
NKX2-2O95096 AC133794.1-201ENST00000602731 914 ntBASIC5.2□□□□□ -1.58
NKX2-2O95096 AL360012.1-201ENST00000602813 131 ntBASIC5.2□□□□□ -1.58
NKX2-2O95096 AC025175.1-201ENST00000606482 759 ntBASIC5.2□□□□□ -1.58
NKX2-2O95096 AC012557.1-201ENST00000607115 611 ntBASIC5.2□□□□□ -1.58
NKX2-2O95096 AL391834.1-201ENST00000609609 560 ntBASIC5.2□□□□□ -1.58
NKX2-2O95096 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.2□□□□□ -1.58
NKX2-2O95096 AL352984.2-201ENST00000611153 546 ntBASIC5.2□□□□□ -1.58
NKX2-2O95096 AC018926.1-201ENST00000616335 435 ntBASIC5.2□□□□□ -1.58
NKX2-2O95096 AC022306.3-201ENST00000619930 550 ntBASIC5.2□□□□□ -1.58
NKX2-2O95096 AL049777.1-201ENST00000622740 518 ntBASIC5.2□□□□□ -1.58
NKX2-2O95096 AC021106.3-201ENST00000623925 531 ntBASIC5.2□□□□□ -1.58
NKX2-2O95096 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX2-2O95096 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX2-2O95096 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX2-2O95096 MIR193BHG-214ENST00000641765 509 ntBASIC5.2□□□□□ -1.58
NKX2-2O95096 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NKX2-2O95096 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
NKX2-2O95096 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NKX2-2O95096 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-2O95096 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-2O95096 VPS35P1-201ENST00000563400 1518 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NKX2-2O95096 SRRM1P3-201ENST00000426911 2678 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-2O95096 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NKX2-2O95096 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-2O95096 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-2O95096 RNA5SP453-201ENST00000362503 119 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-2O95096 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-2O95096 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-2O95096 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-2O95096 XKRYP4-201ENST00000414395 483 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-2O95096 RPS3P2-201ENST00000421346 701 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 RIMKLBP2-201ENST00000424737 654 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-2O95096 AC138761.5-201ENST00000433967 325 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 AL590399.4-201ENST00000436561 601 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.19□□□□□ -1.58
NKX2-2O95096 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.19□□□□□ -1.58
NKX2-2O95096 AC005297.1-201ENST00000444765 862 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-2O95096 XKRYP5-201ENST00000449659 483 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 AL451063.1-201ENST00000450164 1133 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
NKX2-2O95096 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.19□□□□□ -1.58
NKX2-2O95096 SNORA43.3-201ENST00000517240 103 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 CYCSP22-201ENST00000517555 339 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-2O95096 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.19□□□□□ -1.58
NKX2-2O95096 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NKX2-2O95096 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.19□□□□□ -1.58
NKX2-2O95096 AC112503.2-201ENST00000609005 552 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 AC016957.2-201ENST00000616998 848 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 AL445528.2-201ENST00000620582 470 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.19□□□□□ -1.58
NKX2-2O95096 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-2O95096 AC073869.7-201ENST00000640874 297 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-2O95096 AC091305.2-201ENST00000624049 1576 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-2O95096 AC015689.2-201ENST00000528172 1738 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 AC068870.1-201ENST00000563737 2455 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-2O95096 AC006206.1-201ENST00000544842 3387 ntBASIC5.19□□□□□ -1.58
NKX2-2O95096 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-2O95096 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-2O95096 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-2O95096 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NKX2-2O95096 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-2O95096 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-2O95096 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-2O95096 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-2O95096 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-2O95096 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-2O95096 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-2O95096 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-2O95096 MIR16-2-201ENST00000362117 81 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 RN7SKP292-201ENST00000365522 317 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.18□□□□□ -1.58
NKX2-2O95096 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.18□□□□□ -1.58
NKX2-2O95096 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-2O95096 SNORA79B-201ENST00000410557 148 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 AL158825.1-201ENST00000414735 521 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 RPL34P3-201ENST00000421454 338 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 AC007161.1-204ENST00000423039 460 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 OR6K4P-201ENST00000423179 955 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-2O95096 RPS27P5-201ENST00000444247 244 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 AZGP1P2-201ENST00000454506 345 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-2O95096 RN7SL197P-201ENST00000466981 299 ntBASIC5.18□□□□□ -1.58
NKX2-2O95096 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms