Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RN7SKP184-201ENST00000362348 333 ntBASIC4.13□□□□□ -1.75
SSSCA1O60232 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.13□□□□□ -1.75
SSSCA1O60232 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.13□□□□□ -1.75
SSSCA1O60232 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.13□□□□□ -1.75
SSSCA1O60232 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.13□□□□□ -1.75
SSSCA1O60232 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.13□□□□□ -1.75
SSSCA1O60232 RPS29P10-201ENST00000439197 166 ntBASIC4.13□□□□□ -1.75
SSSCA1O60232 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSSCA1O60232 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.13□□□□□ -1.75
SSSCA1O60232 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
SSSCA1O60232 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.13□□□□□ -1.75
SSSCA1O60232 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.13□□□□□ -1.75
SSSCA1O60232 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.13□□□□□ -1.75
SSSCA1O60232 AL049872.1-201ENST00000556323 322 ntBASIC4.13□□□□□ -1.75
SSSCA1O60232 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.13□□□□□ -1.75
SSSCA1O60232 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SSSCA1O60232 RBM22P1-201ENST00000578589 1214 ntBASIC4.13□□□□□ -1.75
SSSCA1O60232 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.13□□□□□ -1.75
SSSCA1O60232 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.13□□□□□ -1.75
SSSCA1O60232 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.13□□□□□ -1.75
SSSCA1O60232 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.13□□□□□ -1.75
SSSCA1O60232 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.13□□□□□ -1.75
SSSCA1O60232 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.13□□□□□ -1.75
SSSCA1O60232 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSSCA1O60232 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSSCA1O60232 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSSCA1O60232 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSSCA1O60232 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
SSSCA1O60232 AC106872.5-201ENST00000508856 1416 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.12□□□□□ -1.75
SSSCA1O60232 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSSCA1O60232 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSSCA1O60232 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSSCA1O60232 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
SSSCA1O60232 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSSCA1O60232 AC068446.1-201ENST00000556425 1549 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.12□□□□□ -1.75
SSSCA1O60232 AC092747.4-201ENST00000620519 1861 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.12□□□□□ -1.75
SSSCA1O60232 MIR133B-201ENST00000362210 119 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 RNA5SP90-201ENST00000364801 99 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 AC004386.1-201ENST00000393214 761 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 MIR1275-201ENST00000408770 80 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 HMGN1P20-201ENST00000411849 300 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.12□□□□□ -1.75
SSSCA1O60232 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.12□□□□□ -1.75
SSSCA1O60232 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSSCA1O60232 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.12□□□□□ -1.75
SSSCA1O60232 Z84478.1-201ENST00000438230 1219 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 RPS19P6-201ENST00000441327 433 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.12□□□□□ -1.75
SSSCA1O60232 AL359839.1-201ENST00000451975 1160 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 HLA-DPA3-207ENST00000454398 229 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 RPL9P15-201ENST00000491096 532 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 AC020890.1-201ENST00000491837 504 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.12□□□□□ -1.75
SSSCA1O60232 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC4.12□□□□□ -1.75
SSSCA1O60232 NRBF2P4-201ENST00000520874 850 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.12□□□□□ -1.75
SSSCA1O60232 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.12□□□□□ -1.75
SSSCA1O60232 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.12□□□□□ -1.75
SSSCA1O60232 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
SSSCA1O60232 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.12□□□□□ -1.75
SSSCA1O60232 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.12□□□□□ -1.75
SSSCA1O60232 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.12□□□□□ -1.75
SSSCA1O60232 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.12□□□□□ -1.75
SSSCA1O60232 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SSSCA1O60232 MIR6774-201ENST00000614651 70 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 AL122125.1-201ENST00000616999 600 ntBASIC4.12□□□□□ -1.75
SSSCA1O60232 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SSSCA1O60232 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.12□□□□□ -1.75
SSSCA1O60232 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.12□□□□□ -1.75
SSSCA1O60232 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSSCA1O60232 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SSSCA1O60232 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
SSSCA1O60232 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSSCA1O60232 SAMMSON-213ENST00000641336 1521 ntBASIC4.11□□□□□ -1.75
SSSCA1O60232 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSSCA1O60232 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.11□□□□□ -1.75
SSSCA1O60232 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSSCA1O60232 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSSCA1O60232 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSSCA1O60232 AC133552.1-201ENST00000569988 4007 ntBASIC4.11□□□□□ -1.75
SSSCA1O60232 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SSSCA1O60232 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.11□□□□□ -1.75
SSSCA1O60232 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSSCA1O60232 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.11□□□□□ -1.75
SSSCA1O60232 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SSSCA1O60232 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SSSCA1O60232 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SSSCA1O60232 RNU1-146P-201ENST00000364015 165 ntBASIC4.11□□□□□ -1.75
SSSCA1O60232 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSSCA1O60232 SNORA2.3-201ENST00000383920 135 ntBASIC4.11□□□□□ -1.75
SSSCA1O60232 TMBIM7P-201ENST00000418074 855 ntBASIC4.11□□□□□ -1.75
SSSCA1O60232 SLC35E1P1-201ENST00000419313 864 ntBASIC4.11□□□□□ -1.75
SSSCA1O60232 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSSCA1O60232 RPS11P7-201ENST00000442125 465 ntBASIC4.11□□□□□ -1.75
SSSCA1O60232 TIMM8BP2-201ENST00000445940 251 ntBASIC4.11□□□□□ -1.75
SSSCA1O60232 EEF1B2P3-201ENST00000447718 678 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms