Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL512422.1-201ENST00000407033 553 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 OR3A2-201ENST00000408891 1076 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.92□□□□□ -1.62
UPK1AO00322 CHEK2P5-201ENST00000423877 246 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 OR2AH1P-201ENST00000425717 928 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 FAM96AP1-201ENST00000430879 482 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.92□□□□□ -1.62
UPK1AO00322 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.92□□□□□ -1.62
UPK1AO00322 AL391987.1-201ENST00000441025 200 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.92□□□□□ -1.62
UPK1AO00322 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.92□□□□□ -1.62
UPK1AO00322 BX842559.2-201ENST00000451418 605 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 RN7SL174P-201ENST00000475578 289 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 RPL7P6-201ENST00000480903 738 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 AC108693.1-201ENST00000496068 432 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.92□□□□□ -1.62
UPK1AO00322 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.92□□□□□ -1.62
UPK1AO00322 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.92□□□□□ -1.62
UPK1AO00322 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
UPK1AO00322 AC008814.1-201ENST00000603797 406 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.92□□□□□ -1.62
UPK1AO00322 AC108359.1-201ENST00000616451 1211 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 AC015914.2-201ENST00000618167 288 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 AL049767.1-202ENST00000637826 242 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UPK1AO00322 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UPK1AO00322 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.92□□□□□ -1.62
UPK1AO00322 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UPK1AO00322 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
UPK1AO00322 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UPK1AO00322 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
UPK1AO00322 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.92□□□□□ -1.62
UPK1AO00322 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.92□□□□□ -1.62
UPK1AO00322 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UPK1AO00322 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
UPK1AO00322 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
UPK1AO00322 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.91□□□□□ -1.62
UPK1AO00322 AC068870.3-201ENST00000625077 2536 ntBASIC4.91□□□□□ -1.62
UPK1AO00322 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.91□□□□□ -1.62
UPK1AO00322 AC104260.2-201ENST00000623551 3497 ntBASIC4.91□□□□□ -1.62
UPK1AO00322 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.91□□□□□ -1.62
UPK1AO00322 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.91□□□□□ -1.62
UPK1AO00322 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
UPK1AO00322 AC027279.1-201ENST00000568885 4284 ntBASIC4.91□□□□□ -1.62
UPK1AO00322 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
UPK1AO00322 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
UPK1AO00322 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.91□□□□□ -1.62
UPK1AO00322 AL359643.1-201ENST00000404109 423 ntBASIC4.91□□□□□ -1.62
UPK1AO00322 U3.32-201ENST00000408116 212 ntBASIC4.91□□□□□ -1.62
UPK1AO00322 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.91□□□□□ -1.62
UPK1AO00322 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.91□□□□□ -1.62
UPK1AO00322 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.91□□□□□ -1.62
UPK1AO00322 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.91□□□□□ -1.62
UPK1AO00322 SPRYD7P1-201ENST00000443861 570 ntBASIC4.91□□□□□ -1.62
UPK1AO00322 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.91□□□□□ -1.62
UPK1AO00322 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.91□□□□□ -1.62
UPK1AO00322 RN7SL101P-201ENST00000496350 279 ntBASIC4.91□□□□□ -1.62
UPK1AO00322 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.91□□□□□ -1.62
UPK1AO00322 AC006427.1-201ENST00000514359 712 ntBASIC4.91□□□□□ -1.62
UPK1AO00322 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
UPK1AO00322 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.91□□□□□ -1.62
UPK1AO00322 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.91□□□□□ -1.62
UPK1AO00322 RN7SL708P-201ENST00000580952 299 ntBASIC4.91□□□□□ -1.62
UPK1AO00322 RN7SL435P-201ENST00000584418 282 ntBASIC4.91□□□□□ -1.62
UPK1AO00322 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.91□□□□□ -1.62
UPK1AO00322 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
UPK1AO00322 AC037198.3-201ENST00000616754 526 ntBASIC4.91□□□□□ -1.62
UPK1AO00322 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.91□□□□□ -1.62
UPK1AO00322 AC136428.4-201ENST00000634254 1155 ntBASIC4.91□□□□□ -1.62
UPK1AO00322 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.91□□□□□ -1.62
UPK1AO00322 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.91□□□□□ -1.62
UPK1AO00322 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
UPK1AO00322 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.91□□□□□ -1.62
UPK1AO00322 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC4.91□□□□□ -1.62
UPK1AO00322 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
UPK1AO00322 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
UPK1AO00322 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
UPK1AO00322 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
UPK1AO00322 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.91□□□□□ -1.62
UPK1AO00322 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
UPK1AO00322 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
UPK1AO00322 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.9□□□□□ -1.62
UPK1AO00322 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.9□□□□□ -1.62
UPK1AO00322 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
UPK1AO00322 AC092747.4-201ENST00000620519 1861 ntBASIC4.9□□□□□ -1.62
UPK1AO00322 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
UPK1AO00322 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
UPK1AO00322 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
UPK1AO00322 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.9□□□□□ -1.62
UPK1AO00322 RNA5SP183-201ENST00000362452 119 ntBASIC4.9□□□□□ -1.63
UPK1AO00322 RN7SKP160-201ENST00000363804 340 ntBASIC4.9□□□□□ -1.63
UPK1AO00322 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.9□□□□□ -1.63
UPK1AO00322 U3.25-201ENST00000391209 220 ntBASIC4.9□□□□□ -1.63
UPK1AO00322 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.9□□□□□ -1.63
UPK1AO00322 RN7SKP59-201ENST00000410520 314 ntBASIC4.9□□□□□ -1.63
UPK1AO00322 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.9□□□□□ -1.63
UPK1AO00322 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.9□□□□□ -1.63
UPK1AO00322 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.9□□□□□ -1.63
UPK1AO00322 RPL35AP21-201ENST00000437667 333 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms