Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC024940.4-201ENST00000605507 246 ntBASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL445222.1-201ENST00000607259 628 ntBASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC073342.3-201ENST00000624211 193 ntBASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL360270.2-201ENST00000562952 5985 ntBASIC5.25□□□□□ -1.57
TMX2-CTNND1H3BSU7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC011493.1-201ENST00000596753 1632 ntBASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 MIR133B-201ENST00000362210 119 ntBASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 RNU1-149P-201ENST00000390870 161 ntBASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 U3.36-201ENST00000408418 213 ntBASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC007161.1-204ENST00000423039 460 ntBASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 SRSF1P1-201ENST00000424058 520 ntBASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 GAPDHP25-201ENST00000447061 1001 ntBASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC090510.2-201ENST00000617465 629 ntBASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL731532.2-201ENST00000623542 1953 ntBASIC5.24□□□□□ -1.57
TMX2-CTNND1H3BSU7 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC083899.1-201ENST00000454465 3819 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL162456.1-201ENST00000634535 2006 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 SNORA17.1-201ENST00000362945 126 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 RNU1-43P-201ENST00000365052 165 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 MIR585-201ENST00000384887 94 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 RBMY2KP-201ENST00000418221 992 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC093162.1-201ENST00000419682 124 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 GSTM5P1-201ENST00000434751 660 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC073648.4-201ENST00000442655 781 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 SUMO2P1-206ENST00000445436 284 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 TAAR4P-201ENST00000454843 1039 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC023424.1-201ENST00000496058 459 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC068993.1-201ENST00000546724 589 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 PCNPP1-201ENST00000552501 511 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 MIR3691-201ENST00000578066 90 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 DHFRP1-201ENST00000579682 559 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC011447.4-201ENST00000587562 111 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC006363.1-201ENST00000603806 463 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 OR51C1P-201ENST00000608504 942 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 AC120036.2-201ENST00000509729 1474 ntBASIC5.23□□□□□ -1.57
TMX2-CTNND1H3BSU7 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms