Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MROH3P-201ENST00000435735 2676 ntBASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDHGA11Q9Y5H2 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 Y_RNA.529-201ENST00000384586 119 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 OR4F7P-201ENST00000402444 931 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 OR4F1P-201ENST00000405102 938 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 VDAC1P10-201ENST00000416715 891 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 OR4F2P-201ENST00000424047 938 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 NPM1P22-201ENST00000427761 952 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AC002486.1-201ENST00000435098 391 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 RPL7P11-201ENST00000437586 658 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 CACYBPP1-201ENST00000438592 684 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AL136981.1-203ENST00000451452 3844 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 OR6K1P-201ENST00000456766 971 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AC135721.2-201ENST00000464237 300 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 RN7SL180P-201ENST00000466769 294 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AC007182.2-201ENST00000489251 402 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 RPL35P6-201ENST00000490024 372 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AC012170.1-201ENST00000495139 359 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 HMGN1P13-201ENST00000505795 138 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 IGLV10-67-201ENST00000519446 325 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AC008126.1-201ENST00000549019 480 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 RPL21P5-201ENST00000554662 472 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AL355076.3-201ENST00000555838 587 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 EIF4EBP2P2-201ENST00000563883 333 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 IGHV1OR15-3-201ENST00000564926 351 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AC138749.2-201ENST00000566048 167 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AC007614.1-201ENST00000566607 309 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AC012507.3-201ENST00000603556 477 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 RN7SL680P-201ENST00000620379 299 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 PISRT1-201ENST00000626175 531 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 TSHZ2-205ENST00000626626 670 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AC016251.2-201ENST00000623393 3089 ntBASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PCDHGA11Q9Y5H2 AC123769.2-201ENST00000624332 5984 ntBASIC7.21□□□□□ -1.25
PCDHGA11Q9Y5H2 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PCDHGA11Q9Y5H2 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.21□□□□□ -1.25
PCDHGA11Q9Y5H2 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.21□□□□□ -1.25
PCDHGA11Q9Y5H2 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PCDHGA11Q9Y5H2 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.21□□□□□ -1.25
PCDHGA11Q9Y5H2 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.25
PCDHGA11Q9Y5H2 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.25
PCDHGA11Q9Y5H2 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.21□□□□□ -1.25
PCDHGA11Q9Y5H2 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 GAPDHP24-201ENST00000328713 983 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 RNY4P34-201ENST00000364779 95 ntBASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDHGA11Q9Y5H2 RNA5SP18-201ENST00000390935 121 ntBASIC7.21□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms