Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 RPS17P15-201ENST00000475609 349 ntBASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 AC087672.1-201ENST00000479876 766 ntBASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 PSMA2P2-201ENST00000504319 686 ntBASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 AC113430.1-201ENST00000506872 718 ntBASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 AC147055.1-201ENST00000509261 750 ntBASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 RNA5SP441-201ENST00000516809 88 ntBASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 FAM106CP-201ENST00000582212 507 ntBASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 AC063977.5-201ENST00000601044 974 ntBASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 AC244107.2-201ENST00000611773 76 ntBASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 MIR6885-201ENST00000612241 66 ntBASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 AL121890.2-201ENST00000617644 465 ntBASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 AC006840.1-201ENST00000623069 542 ntBASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 AP000648.2-201ENST00000624182 404 ntBASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 CASC19-204ENST00000641001 2055 ntBASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 KARSP1-201ENST00000451871 1752 ntBASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.5□□□□□ -1.69
KCNIP3Q9Y2W7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AL356317.1-201ENST00000396110 1436 ntBASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC104333.2-201ENST00000422630 192 ntBASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AL022331.1-201ENST00000429025 477 ntBASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AL392003.1-201ENST00000434394 243 ntBASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC009963.3-201ENST00000458090 486 ntBASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 RN7SL583P-201ENST00000475692 287 ntBASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AL158068.1-201ENST00000506116 616 ntBASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC109464.1-201ENST00000511091 819 ntBASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC004232.2-201ENST00000574245 821 ntBASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC009303.3-201ENST00000591103 736 ntBASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AC012511.1-201ENST00000608140 449 ntBASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 AL390318.1-201ENST00000624564 687 ntBASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
KCNIP3Q9Y2W7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms