Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 AC098976.1-201ENST00000513014 541 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 EIF3KP3-201ENST00000514461 639 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 HMGN2P6-201ENST00000551091 273 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 AC015720.2-201ENST00000567709 334 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 AC005341.1-201ENST00000571086 708 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 AC011626.1-201ENST00000604710 562 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 MIR6820-201ENST00000611508 62 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 MIR6837-201ENST00000620884 64 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 AC073136.1-201ENST00000449426 2884 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 CASC19-248ENST00000641674 1356 ntBASIC6.31□□□□□ -1.4
UPF3BQ9BZI7 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 RNA5SP335-201ENST00000363817 110 ntBASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 RN7SKP103-201ENST00000363848 320 ntBASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 AC007618.1-201ENST00000366455 732 ntBASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 MIR589-201ENST00000385238 99 ntBASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 RPL23AP27-201ENST00000415161 451 ntBASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 RN7SL51P-201ENST00000468230 285 ntBASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 RN7SL423P-201ENST00000486202 304 ntBASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 AC004453.1-201ENST00000487895 408 ntBASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 NMNAT1P5-201ENST00000559657 841 ntBASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 AL121612.2-201ENST00000612261 482 ntBASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 AC005261.6-201ENST00000623072 1387 ntBASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
UPF3BQ9BZI7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 RNA5SP319-201ENST00000362768 119 ntBASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 SNORA48.4-201ENST00000391089 134 ntBASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 BX119904.3-201ENST00000428194 957 ntBASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 RPL12P3-201ENST00000440080 396 ntBASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 GAPDHP25-201ENST00000447061 1001 ntBASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 OR4A46P-201ENST00000527255 933 ntBASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 YWHABP2-201ENST00000540201 713 ntBASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 AC019322.1-201ENST00000571869 389 ntBASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 AC060766.1-201ENST00000590824 627 ntBASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 AL162431.4-201ENST00000604674 411 ntBASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 AC010245.2-201ENST00000606908 1167 ntBASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 Mico1.1-201ENST00000611698 204 ntBASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 CASC19-264ENST00000641912 1184 ntBASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
UPF3BQ9BZI7 PABPC1P6-201ENST00000445594 1829 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms