Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 RPS17P17-201ENST00000419392 409 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AC245884.2-201ENST00000426257 404 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AC234781.2-201ENST00000426370 994 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 RPL21P110-201ENST00000433345 446 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AP000936.3-201ENST00000438127 255 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 GSTA7P-201ENST00000438425 448 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 DNAJC19P5-201ENST00000443295 316 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 RPL21P134-201ENST00000453468 483 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 OSTCP1-201ENST00000455507 450 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AP003385.3-201ENST00000472498 287 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AC098818.1-201ENST00000478593 252 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 RPS3AP43-201ENST00000479743 781 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 RN7SKP11-201ENST00000517018 287 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AC020937.1-201ENST00000519677 1013 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AP001317.1-201ENST00000531194 960 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AL132640.1-201ENST00000559594 619 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AP005136.1-201ENST00000579765 429 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 MIR4420-201ENST00000583944 77 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 BNIP3P26-201ENST00000600827 554 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AC090246.1-201ENST00000616499 426 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 MIR6823-201ENST00000622118 61 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 MIR4278-201ENST00000636094 69 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 ECM1P2-201ENST00000503354 1577 ntBASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM55Q9BYV6 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.59□□□□□ -1.36
TRIM55Q9BYV6 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.59□□□□□ -1.36
TRIM55Q9BYV6 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
TRIM55Q9BYV6 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
TRIM55Q9BYV6 CAP1P2-201ENST00000417455 1409 ntBASIC6.59□□□□□ -1.36
TRIM55Q9BYV6 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AP000776.1-201ENST00000530032 1663 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 RN7SKP191-201ENST00000364713 306 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 SNORD94-201ENST00000386037 137 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC245036.1-201ENST00000391727 309 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AL590290.1-201ENST00000405336 380 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 CYCSP17-201ENST00000407870 315 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 RNU6-757P-201ENST00000410334 100 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 RN7SKP182-201ENST00000410772 298 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AL593851.1-201ENST00000426171 157 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 USP9YP31-201ENST00000431405 881 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 YWHAZP7-201ENST00000436906 631 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 MTND3P1-201ENST00000441336 220 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 ARL4AP3-201ENST00000441452 574 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 E2F6P3-201ENST00000441743 743 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 TVP23CP1-201ENST00000450317 639 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 RPL7AP52-201ENST00000458096 790 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 RN7SL165P-201ENST00000477476 291 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC104090.1-201ENST00000506341 1171 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 MINOS1P4-201ENST00000515470 318 ntBASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM55Q9BYV6 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms