Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 RNA5SP90-201ENST00000364801 99 ntBASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 RNA5SP487-201ENST00000410186 122 ntBASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 AL445213.1-201ENST00000412589 747 ntBASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 BX119904.3-201ENST00000428194 957 ntBASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 AC090018.1-201ENST00000434369 367 ntBASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 BTF3P6-201ENST00000448054 499 ntBASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 SBDSP1-204ENST00000453858 737 ntBASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 AC100832.1-201ENST00000471945 383 ntBASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 RN7SL184P-201ENST00000488308 297 ntBASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 SNORD95-201ENST00000579879 68 ntBASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 AC118658.2-201ENST00000618697 459 ntBASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 AC136428.4-201ENST00000634254 1155 ntBASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 AC053481.2-202ENST00000582394 1500 ntBASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.8□□□□□ -1.64
RSPO3Q9BXY4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 RNA5SP319-201ENST00000362768 119 ntBASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 RN7SKP153-201ENST00000365026 316 ntBASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 AC009238.2-201ENST00000431026 355 ntBASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 AL627308.1-201ENST00000435693 821 ntBASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 YWHAEP1-201ENST00000453697 763 ntBASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 RPL7P45-201ENST00000455851 743 ntBASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 SIAH1P1-201ENST00000479411 923 ntBASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 RN7SL466P-201ENST00000497546 295 ntBASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 AC016180.1-201ENST00000567945 403 ntBASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 AC002069.2-201ENST00000603580 883 ntBASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 MIR6798-201ENST00000612887 67 ntBASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 MIR6730-201ENST00000622213 67 ntBASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 MIR8080-201ENST00000622224 89 ntBASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 CYP4F35P-202ENST00000636121 390 ntBASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 AC092747.4-201ENST00000620519 1861 ntBASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RSPO3Q9BXY4 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 CASC19-248ENST00000641674 1356 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 AL391361.1-201ENST00000405580 489 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 RPS4XP16-201ENST00000427198 791 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 FTLP19-201ENST00000433300 394 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 RN7SL189P-201ENST00000468631 289 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 UBA52P7-201ENST00000486088 380 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 AC022133.1-201ENST00000490961 571 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 AL049874.2-201ENST00000492636 288 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 AC015864.1-201ENST00000496512 544 ntBASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.78□□□□□ -1.64
RSPO3Q9BXY4 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms