Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AP001273.1-201ENST00000624493 3152 ntBASIC3.96□□□□□ -1.78
AP1S3Q96PC3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC3.96□□□□□ -1.78
AP1S3Q96PC3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 NR1H5P-201ENST00000452683 1377 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 OR9G4-201ENST00000302957 984 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 RN7SKP184-201ENST00000362348 333 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 RN7SKP224-201ENST00000364140 325 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 MIR551A-201ENST00000385042 96 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 RMRPP5-201ENST00000411156 267 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 RPL12P9-201ENST00000412942 488 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AL354890.1-201ENST00000413730 346 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 CYCSP10-201ENST00000417973 294 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AC007161.1-204ENST00000423039 460 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 RPL12P17-201ENST00000432393 498 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 PNKDP1-201ENST00000435914 430 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AL157385.1-201ENST00000446973 268 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AL450023.1-201ENST00000450868 751 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 CEACAMP11-201ENST00000455211 583 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 RPL7AP28-201ENST00000464513 571 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 RN7SL193P-201ENST00000491708 276 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AC109464.1-201ENST00000511091 819 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 RNU2-45P-201ENST00000516068 187 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 CETN3-206ENST00000522864 738 ntTSL 3 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 MED21-206ENST00000546323 575 ntTSL 3 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 DCN-210ENST00000547568 823 ntTSL 3 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AC002310.3-201ENST00000569728 723 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 MIR4502-201ENST00000580432 81 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AC063977.5-201ENST00000601044 974 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AC087283.1-201ENST00000604029 1074 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AC009027.1-201ENST00000604510 479 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AC244107.2-201ENST00000611773 76 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AC009237.17-201ENST00000618111 748 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AP000648.2-201ENST00000624182 404 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AP001052.1-201ENST00000626421 99 ntBASIC3.95□□□□□ -1.78
AP1S3Q96PC3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC3.95□□□□□ -1.78
AP1S3Q96PC3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AC091305.2-201ENST00000624049 1576 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AL162456.1-201ENST00000634535 2006 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 RNU1-94P-201ENST00000362627 173 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 RN7SKP250-201ENST00000363924 321 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AL359885.1-201ENST00000415786 903 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 Z93019.1-201ENST00000416450 973 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AC004690.1-201ENST00000418216 328 ntBASIC3.94□□□□□ -1.78
AP1S3Q96PC3 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC3.94□□□□□ -1.78
AP1S3Q96PC3 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms